| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2231 |
|---|
| Symbol | |
|---|
| ID | 3934685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 2236619 |
|---|
| End bp | 2237068 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637904588 |
|---|
| Product | cyclase/dehydrase |
|---|
| Protein accession | YP_510173 |
|---|
| Protein GI | 89054722 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.619075 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCAAACC ATTCCGAGAC CAGGCAGCTG CCCTACACGG CCAAACAGAT GTACGATCTT
GTGGCGGACG TGGCGAAATA CCCTGACTTC ATTCCCTGGA CCATCGCCAC GCGCGTGAAA
TCGGTGGAGC CGGTGGACGA CCACGCGGTG ATGCATGCGG ACATGGTCGT GGGGTTTCGG
ATGTTCCGGG AGAAGTTTCT GTCTCGCGTG GCGCTGTGGG AGGCGGAGGG AAAAATCGAC
ACGGAATATG TGGACGGCCC CTTCAAGTAC CTGATTTCAA ATTGGGAATT TACCGACACT
GAGACGGGGT GCGACGTCCA TTTCAAGGTG GATTTTGAAT TCAAGAACCG CCTGTTGCAG
GGGGCGGCGG GTCTGTTCTT CATGGACGCC ATGCAGCGGA TTGTGCGGGC GTTTGAGAAA
CGTGCCGACG CGCTCTATGG GTCGGTCTAG
|
|---|
| Protein sequence | MPNHSETRQL PYTAKQMYDL VADVAKYPDF IPWTIATRVK SVEPVDDHAV MHADMVVGFR
MFREKFLSRV ALWEAEGKID TEYVDGPFKY LISNWEFTDT ETGCDVHFKV DFEFKNRLLQ
GAAGLFFMDA MQRIVRAFEK RADALYGSV
|
|---|
| |