Gene Jann_2206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2206 
Symbol 
ID3934660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2215020 
End bp2215361 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content59% 
IMG OID637904563 
Producttransmembrane prediction 
Protein accessionYP_510148 
Protein GI89054697 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.270827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAGAT CTGACATTGA GAAACGTGTC GACCTGTCAA CAATGCTCGA CAGCCGCTTT 
CGGGTGCCGG GCACATCCCT TCGGTTTGGT TGGGACTCCG TCCTGGGCCT CGTCCCCGGC
GTGGGTGATG TCGCCACCCT CGCACCGTCT GCCTACCTGA TCTATCGCGG GCACATGCTT
GGGGCGAGAA AGCGGATCAT CGGTCGGATG GCCGTCAACA CCGGGATCGA CTTTGTCGTG
GGGGCCGTGC CGATACTTGG GGACGTGTTC GATCTGGCCT TCAAGGCAAA CAATCGAAAT
GTTGCGCCAC TTCGGGCTGA ACTTGAACAT CGCAAAAGCT GA
 
Protein sequence
MPRSDIEKRV DLSTMLDSRF RVPGTSLRFG WDSVLGLVPG VGDVATLAPS AYLIYRGHML 
GARKRIIGRM AVNTGIDFVV GAVPILGDVF DLAFKANNRN VAPLRAELEH RKS