Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2196 |
Symbol | |
ID | 3934650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2202286 |
End bp | 2206293 |
Gene Length | 4008 bp |
Protein Length | 1335 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637904553 |
Product | acriflavin resistance protein |
Protein accession | YP_510138 |
Protein GI | 89054687 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGTG TTATCGACTG GGCCGCCTCC CGCGCCCGTA TGGTCATCGC CTTCGTGCTG TTGTCGCTGA CCGTCGGCAC CTTTGCCTAT GTCTCGCTTC CCAAGGAAGG CGAGCCGGAT ATCGACATCC CCGGCCTGTT CATCTCCGTC CCCTTCCCCG GCATTTCCGC AGCCGACAGT GAACGCCTTC TGGTGCGCCC GATGGAGGCT GAATTCCAGG ACCTCGACGG GTTGCTCTCG ATCAATTCGA CGGCGGCCGA AGGGTTCGCG GGCATCTTTG TCGAGTTCGA GTTCGGGTGG GACAAGTCCG GTACCATCGC CGATGTGCGT GACGCCATGG GCCGGGCCGA GGCGCAGTTT CCCGATGGCG CGGAAAGCTA TCAGATCGAT GAGATCAACT TTTCCGAGTT CCCGATTATC GTCGTTGCCC TCTCCGGCGA TGCGCCCGAG CGCACGCTGA TCCGCCTTGC CGAGGAGATG CAGGACGAAT TGGAAACCCT GGCCCCGGTG CTGAGTGCCG GGATCGCCGG GTCGCGGGAC GAGATGCTGG AAGTGATCCT CGATCCCCTC GCGTTGGAGG CCTATGACGT CACCGCCGCT GATCTGATCA ATGCCGTGCA AGGTAACAAC CAGCTCATCG CCGCCGGTGA GGTGCGCAGC GACAATGGCG CGATATCCGT GTCCATCCCC TCCAGCTTTG ACGGGGCCCA GGACGTCTAT GACCTGGCCA TCACCGTCAA CGGCGACCGG GTCGTGACCC TTGGCGATCT GGCCGAGATC CGGCTGACTT ATCAGGACCG GGCGGGCACA GCGCGCTTTA ACGGTGAGAC GACCGTGGCC CTTCAGGTGA TCAAACGTCT GGGCTTCAAT ATCATCGACA TGGTGGCCGA GGTCCGGGAG ACGGTGGACG CCGTCCAGGC CGACTGGCCC GAAGAATTGC GCGCCTCGGT CCATGTCGAA ACCTCCCTCG ACCGGTCGGT GGAAGTCGAC AGCATGGTCC GCCAGCTGGA GGGATCGGTA CTGACGGCCA TTGCGCTGGT GATGATCGTG GTGCTGGCCG CCCTGGGCAC GCGCTCGGCC CTGCTGGTGG GCTTTGCGAT TCCAACATCG TTCCTGCTGT GCTTCATCCT GCTTGGGATC ATGGGCATCA CCATCTCGAA TATCGTGATG TTCGGCCTGA TCCTTGCGGT TGGCATGTTG GTGGACGGGG CAATCGTGGT CGTCGAATAC GCCGACCGCC GCCTGAGAGA GGGCGCACGC CCCATGCAGG CTTACACAGA GGCCGCCAAG CGGATGTTCT GGCCCATCGT GTCCTCCACC GCCACAACGC TTTGCGCCTT CCTGCCGATG CTGTTCTGGC CCGGCGTGCC CGGTGAATTC ATGGGCATGC TGCCGGTGAC GTTGATTTTC GTCCTGTCGG CGTCGCTGAT CGTGGCGCTG ATTTATCTGC CGGTTCTGGG CGGCGTTGCG GCCCGCGCGT CGCGCCTGAT CGACAACACG TCTGACACCT TCAAGGGTCT CGTCCCCTGG TATCTGGTTC GCCTCGTGGC AACCATCGGG CTTGGCTACC TCATGTTCCT CTCGGCGCTT CAGGTCGTCA GGCCGGGGGT GCTGTTTGCC TTCCCCGATA CGATGTCTCC GCTGGTGCAG ACCGGGATCA GCGCCTCCAT TTTTGTCCTG CTGTGCTTCG CAATGTCGAT CTTCATCGCG TCGATCCAGA TTGCTTCGCG CCAGACGCGG GTGAAATCGG GCTATCGCAG GTCGCCGTTC GGGTGGTTCA TCCACCTGAT GACGGGCAAC CCGATCATGC CGCTGGTCGC CATCGCGGTC GTCGGGGCTT TTGTCGGCAT CGTCTTTTCC TATTTTGGAG AGAACAATAA CGGCGTCGAA TTCTTCGTGG AGACGGAGCC GGAAACTGCC ATCGTCTACG TCCGCGCGCG CGGCAACCTT TCAGTCGCGG AACAAGATGC CCTTGTCGCG CAGGTCGAAG AGATCGTCCT GACCCAGCAA GGGGTGAGGG ACGTCTTCGC CTTCGCCGGT GACGGTGGCC TGGACAGCAA CACAGGCGGT GCGGCGGTGC CCGCGGATAC AATCGGTCAG GTCCAGATTG ATCTGGAGCC GTGGGGCAAC CGCCCCGCCG GTGGAGATAT TCTGGACCAG CTGCAAGCCC GTCTGAACGT GATCCCCGGT ATCCAGACCG AGATCCTGGC GGCAACCGGG GGACCTGGCG ACGCCAAACC CGTATCCCTG CGCCTGTCCG GCGACAATTG GGACGAGTTG CGCGCGGCAA CGGAAACGGT GCGCACCTAT TATGAGAACC TGAACGGCCT GATCCTGGTT GAGGACACCT TGCCGCTGCC GGGCATCGAA TGGGAAGTCA ACGTCGATGT CGAAGCGGCG GGCCGCTTTG GGGCCGATGC CTCGACCGTG GGGGCCATGG TGCAATTGGT GACGCGGGGC ATTCTGCTCG ACACCATGCG CGTGCCCACA TCGGACGAAG AGATCGACAT TCGCGTGCGC TTCCCGGAAG AGGCGCGCGT TCTGTCCACC CTCGACAGCC TGCGGGTGCG GACCAATGAT GGCCTGATCC CGCTCTCGAA CTTCGTGACC TATAGCCCGA CGCCACAGCT GGCCGAAATC TCGCGCCGGG ATCAAAGCCG TATCTTCGAG GTGAAGGCCG ATGTGGAAAG CGACATCATC ATCTACGAAA TCGTGCCGCT GGATGAAGAT GGCGTGGCGA TGGAGGATGA CGTGATCGCC CTCGGCTATG GCACCACCAG ATCGCAGGAA CAGATCGACA TGGGGGCAGA GGCCAATCTG GTGATCCGCA CGCCCAATAC CGGTCTCGCC GCGCTGTTTG GTGAGGCGGA ATCAATCGCC TATCACAACG TGCCCGACTA CGCAGGCGAC AGACCGTTGG AGGACCTGGC CCAGGCCATT GCCGATGGTG AGGCAGAACT GCGCACGACC CCCATGACCC CGAGCGAGCG CATTGAACGG ATCACGGAGT GGCTGGAGAC GGAAACGCCC CTGCCCGCCT CCGTCAGTTG GGAATGGGGT GGCGATCAGG AAGAACAGGA GGAATCCGGT CAGTTCCTGA TGAGCGCATT TGCCGCCGCC CTGGGCCTGA TGTTCATCAT CCTGCTGGCG CAGTTCAACT CGATCTACAA CGCTGTCCTC GTGTTGCTGG CGGTGGTTTT GTCCACCACG GGCGTGCTGA TCGGTATGCT GGTGATGGAT CAGACCTTCT CCATCATCAT GACCGGCACC GGGATCGTGG CGTTGGCGGG GATCGTGGTG AACAACAACA TTGTTCTGAT CGACACCTAC CAGGAATATT CCCGCTTCAT GCCGAGGCTG GAGGCCATCG TGCGCACGGC AGAGGCGCGC ATCCGCCCGG TTTTGCTGAC CACAATCACC ACAATGGCGG GCCTCGCCCC GATGATGTAC GGCGTCTCGC TCGATTTCGG CGGCGGCGGC TACACCATCG ACAGCCCCAC CGCGCTGTGG TGGAAGCAGC TGGCCACGGC GGTCGTCTTC GGCCTGGGCA TCGCGACCGT TCTGACGCTG ATCTTCACGC CGTCGCTTCT GGCCCTGCGG GTCTGGTTCT GGACGATCCT CGGCGGGTTT TTCCGTGGGA TGGCACGCCT CGGGGCGCGC CGGATGAGCA AGCGCGGCCA GGATTGGGCG CTGCAACGGC AGGCCCGTCG CACCCGTGAG CCGGTCATCT ATTGGGATGA GGATCCGTTT GTGGAGGAGA TTGCGCCCAC ACCCCTGCCC GAAGACGACG CGCCAGCGGA TGCGGAGACC GGGGACGACG CGCAACCAGC CCCGGAGGTT GAGCCTGAGG TCAGCACTCC CGCCGAGGAA GAGGTCGCAG CAACCCCGCA AATCGCGGAA GAGATGCCGC CGGTGCCCGA GGACATGCCC GACGCCGACG ACCCCTATGC CGATACGGAA TTGGAGAACG ACACCACCCC CCGTCCTCCC CTGCGCGCGG CGGAGTGA
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Protein sequence | MTGVIDWAAS RARMVIAFVL LSLTVGTFAY VSLPKEGEPD IDIPGLFISV PFPGISAADS ERLLVRPMEA EFQDLDGLLS INSTAAEGFA GIFVEFEFGW DKSGTIADVR DAMGRAEAQF PDGAESYQID EINFSEFPII VVALSGDAPE RTLIRLAEEM QDELETLAPV LSAGIAGSRD EMLEVILDPL ALEAYDVTAA DLINAVQGNN QLIAAGEVRS DNGAISVSIP SSFDGAQDVY DLAITVNGDR VVTLGDLAEI RLTYQDRAGT ARFNGETTVA LQVIKRLGFN IIDMVAEVRE TVDAVQADWP EELRASVHVE TSLDRSVEVD SMVRQLEGSV LTAIALVMIV VLAALGTRSA LLVGFAIPTS FLLCFILLGI MGITISNIVM FGLILAVGML VDGAIVVVEY ADRRLREGAR PMQAYTEAAK RMFWPIVSST ATTLCAFLPM LFWPGVPGEF MGMLPVTLIF VLSASLIVAL IYLPVLGGVA ARASRLIDNT SDTFKGLVPW YLVRLVATIG LGYLMFLSAL QVVRPGVLFA FPDTMSPLVQ TGISASIFVL LCFAMSIFIA SIQIASRQTR VKSGYRRSPF GWFIHLMTGN PIMPLVAIAV VGAFVGIVFS YFGENNNGVE FFVETEPETA IVYVRARGNL SVAEQDALVA QVEEIVLTQQ GVRDVFAFAG DGGLDSNTGG AAVPADTIGQ VQIDLEPWGN RPAGGDILDQ LQARLNVIPG IQTEILAATG GPGDAKPVSL RLSGDNWDEL RAATETVRTY YENLNGLILV EDTLPLPGIE WEVNVDVEAA GRFGADASTV GAMVQLVTRG ILLDTMRVPT SDEEIDIRVR FPEEARVLST LDSLRVRTND GLIPLSNFVT YSPTPQLAEI SRRDQSRIFE VKADVESDII IYEIVPLDED GVAMEDDVIA LGYGTTRSQE QIDMGAEANL VIRTPNTGLA ALFGEAESIA YHNVPDYAGD RPLEDLAQAI ADGEAELRTT PMTPSERIER ITEWLETETP LPASVSWEWG GDQEEQEESG QFLMSAFAAA LGLMFIILLA QFNSIYNAVL VLLAVVLSTT GVLIGMLVMD QTFSIIMTGT GIVALAGIVV NNNIVLIDTY QEYSRFMPRL EAIVRTAEAR IRPVLLTTIT TMAGLAPMMY GVSLDFGGGG YTIDSPTALW WKQLATAVVF GLGIATVLTL IFTPSLLALR VWFWTILGGF FRGMARLGAR RMSKRGQDWA LQRQARRTRE PVIYWDEDPF VEEIAPTPLP EDDAPADAET GDDAQPAPEV EPEVSTPAEE EVAATPQIAE EMPPVPEDMP DADDPYADTE LENDTTPRPP LRAAE
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