| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2072 |
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| Symbol | mgsA |
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| ID | 3934525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2081329 |
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| End bp | 2081709 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637904428 |
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| Product | methylglyoxal synthase |
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| Protein accession | YP_510014 |
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| Protein GI | 89054563 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1803] Methylglyoxal synthase |
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| TIGRFAM ID | [TIGR00160] methylglyoxal synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.246305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.326665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCACCA TCGCCCTTGT CGCCCATGAC CAGAAGAAAG ACGCGCTTGT GGCCTGGGCC
AAGGCCCATG AGGCGGACTT GCAGGGCCAC ACGCTATTCG CCACCGGCAC AACGGGCGGG
CGGCTGCAGG CAGAGACGGC GCTCAGTGTC ACACCGCTGA AATCCGGGCC TCTTGGGGGC
GACGCGCAGC TTGGTGCGAT GATCGCCGAG GGCAAGCTGC CCGTCCTCGT CTTCTTCATC
GACCCGCTGT CGGCCATGCC CCACGACGTC GATGTGAAAT CCCTGATCCG TCTGGCGACG
CTTTACGACA CCCTTCTGGC GCTGAACGAG GCGACAGCGA CGGGCCTCAT TCGTGGTTTG
CCTGCGCCGT CTCCGACATA G
|
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| Protein sequence | MTTIALVAHD QKKDALVAWA KAHEADLQGH TLFATGTTGG RLQAETALSV TPLKSGPLGG
DAQLGAMIAE GKLPVLVFFI DPLSAMPHDV DVKSLIRLAT LYDTLLALNE ATATGLIRGL
PAPSPT
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