Gene Jann_1995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1995 
Symbol 
ID3934447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1995838 
End bp1996578 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content64% 
IMG OID637904350 
Productmetal-dependent hydrolases related to alanyl-tRNA synthetase 
Protein accessionYP_509937 
Protein GI89054486 
COG category[R] General function prediction only 
COG ID[COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.140905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.529847 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCG AGACCTTGTT CCTCAAGGAT CCGTATCGCA CCTCCGCCAC AGCCCGCGTC 
ATTGGCCAGA CGGAGGAGGG CGGCGTGATC CTTGATCGCA CCATCTTCTA TGCGCGCGGC
GGGGGGCAAC CCGGTGACAG TGGGGCACTG ACCTGGGACG GCCATCGCCT GCCTATCGCC
ACGGCAGTGA AAGGGCCGAT CCCCGTTGAA GGGGCGGGTG GTGCGATTGT TCTGATCCCC
GCAGAGCCCG CGCCGCTGCC GCCTGTGGGC GCAGAGGTTG AACAGCAACT CGACTGGGAC
CGCCGGCTTG GCCACATGCG CATCCACACG GCGTTGCATC TGTTGTCCGT CGTGATCCCT
CTGCCCGTGA CCGGCGGGGC CGTGGCCGCC GACAAGGGAC GGCTTGATTT CCTGATGCCG
CAACCGCCCG AAGACAAGAT GATCCTGGAA GGGCAGTTGA ATGCGCTGAT CACCCGCGAT
CTGCCCGTCA GCGTGGAGTG GATCACCGAG AGTCAGTTGA ACGCAAACCC AAACCTCGTG
AAGACACTGT CTGTCCAGCC GCCAAGCGGG GCGGGCGAGA TCCGTCTGGT GCGTATCGGC
GATGAGGCCG CGCCGGTTGA TTTGCAGCCC TGCGGCGGGA CCCACGTGGC ACGGACCTCC
GAGATCGGGA AACTTGCCAT CACCAAGGTG GAGAACAAGG GCAAGCAGAA CCGTCGCGTC
ACAATCGAGT TCGCGTCGTG A
 
Protein sequence
MTTETLFLKD PYRTSATARV IGQTEEGGVI LDRTIFYARG GGQPGDSGAL TWDGHRLPIA 
TAVKGPIPVE GAGGAIVLIP AEPAPLPPVG AEVEQQLDWD RRLGHMRIHT ALHLLSVVIP
LPVTGGAVAA DKGRLDFLMP QPPEDKMILE GQLNALITRD LPVSVEWITE SQLNANPNLV
KTLSVQPPSG AGEIRLVRIG DEAAPVDLQP CGGTHVARTS EIGKLAITKV ENKGKQNRRV
TIEFAS