| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1994 |
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| Symbol | |
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| ID | 3934446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1993442 |
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| End bp | 1995832 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637904349 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_509936 |
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| Protein GI | 89054485 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.952395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCTA TTGTCGGACG ATTGCTGACA GCGCTATTTT TGGCGCTGAT ACCGGTTATG
GCCGCTATGC CGGGTGCGGT TGTCGCGCAG ACGACGGCCC CCGACGCAGA GATCGACTAC
GAGGCCTGGG AACGTGAGGC CGCCGCCACG GAAGCGGTGA TCGAGGGCGC ACGGGCGTCG
ACGTCCTTGC TGGAAACACG CCGTTTGGAA CTGGTGCGTT GGCGGGCGCA GTTTCTCGCA
TCGGATGCCA GCAACGAAGA GCGGATCGCA ACGATCCAAA GCCAGATTGA CGCGCTGGGG
CCCGGCCCGG CGGACGGAGA CGTCGAACCT GACGCAATTG CCGACCGACG GACGGCCCTG
GGAGAGGCGA TGACGGCCGC ACAAGCGCCG GGCTTGCAGG CCAGAGAGGC GTTCAATCGT
GCCAATGGCC TGATCGCCGA GATCGACACG ATACTGCTGG AACGTCAGAC GCAACTGTTG
TTGGAACGCG ACCCTACGCC GCTGAACCCG GCAAATTGGG CCATTGCGAT CAACGCGCTG
GTAGAGTTTG TGCGCGATCA GCAGCGGCAG AAAGGCGGAC TTCCCCAGGA CCCGGACAGT
CTTTTGTCGG CTGCCGAAAC CTTGCCGCTG CTCATTTTCG CGGTCGTGGT TGGACTGGCA
CTTATCGTCT ATGGCCGACC ATTTGTGGCG CGATTGGGTG CCCGTTTTTT GGATACGGAC
CGCCGAAGGG GCCGGACGGC TCTTGGGTTC GCGGTGTCAT TGGGGCAGCT GCTGCTGCCG
TTGGTTGGCT TTCTGGTTAT TATCCTGGCG CTGGATCTAT CCGGCCTTCT CACCGAAGAT
CTTGACGCGC TGGCGGTCGC CGTCGGCGCA TTAATCCTGT CCGTCTACAT CGCCCTCTGG
ATCGCTGGTC GGCTTTTTCC AGATCACGAG GAACGCGCCG CAGCCTTTGA CATTCAAATG
CCCGCTCGGT CCCAGGCGCG GCGCACCATC TTGTTTATCG GCGTCTTTGC GGGCCTTGCG
GCTTTTGCGG AGGCGGTGGC CGCATTCGAT GTCATTCCAC CCGCCGCGAG AGGCGTGTTT
ATCCTGCCCG CCTATGCCGG TCTTGCGTGG ATGTTCATAC GCTTCGGACG GCTGATGCGG
GCCGCGCGCG CTGAGGTTGA GGATGGGGAC TCGTCCAATT TCGGCCAGCG GGTCGTGGGC
CTCCTGACGC GGGCGCTTAC GGTCATCGCC GTCGTCGGCC CGGTGTTGGT CGTGTTCGGC
TATATCAACG CCGCCGAAGC GATCATGTTG CCAACGGTGA CGACGCTTCT GATCCTGGGT
ATTCTGCTCG TGTTGCAATC CGTGATCCGT GATCTTTACG CGGTCCTCTT TCGCTCAACG
GTTGAAGCGG CGGCAGATGC ATTGCTTCCG GTCATCGTAA ATTTCTCGCT GTTTGTTTTG
GCCACGCCGC TTCTTGCGCT TGTATGGGGT GTCCGCCCGG AACGGTTGCA GGAAATATAC
GCCCGTGTGC TGGAGGGGTT CACCCTTGGC GATACGCGGA TCACGCCGGG CATTGTGCTT
GCGGTTCTTC TGGTCTTTGC CGCAGGGGTC CTACTGACGC GCATCTTGCA GGGTGCCCTG
AAATCCACCG TCTTGCCGCG CACGAAGCTG GATGTGGGCG CGCGCAATGC CGTCTCAGCA
GGCGTTGGCT ATGTCGGGAT CGCGTTGGCC TGCGTGATTG CCGTGACCAG CGCGGGCATC
GACCTGACGG CACTTGGTTT CGTCGTCGGC GCTCTGTCCG TCGGCATCGG TTTTGGCCTC
CAGAACGTCG TCTCCAACTT TGTGTCCGGC ATTATCCTCT TGATTGAGCG CCCGATCAGC
GAAGGGGACT GGATCGAGGT CGCGGGCAAT ATGGGGATCG TCAAGGATAT CTCCGTGCGC
TCCACCACGA TCGAGACCTT CGACAAGACC GACGTGATCG TGCCCAACGC GGATTTCATC
AGCGGGACCG TCACCAACTG GACGCGGGGC AATACCGTGG GCCGGGTGGT GCTGACCGTG
GGCGTGGCCT ATGGCAACGA CACGCGCCGG GTGGCTGATC TGCTGATGGA GATCGCCAAT
GGTCACGACG ATGTCGTGAG CTTCCCCGCC CCGGGCGTTG ATTTTCTGGG GTTCGGGGCC
GACAGCCTCG ACTTCCGGGT CCGGGTAATC CTGCGCGACA TCAACCTGTT CGTTACTGTC
CAGACCGAGC TTTATCACCG GATAAATGAG ACATTTGTGC GCGAAGGTAT CGAAATTCCC
TTTGCACAGC GCGATGTCTG GTTGCGCAAT CCCGAGACGC TGCAACCACT GCAATCCAAG
CCGGAACCAC AGCCCCAAGC CGGGCCTTCC ACGCCGCCAC AGGAGGCCTA A
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| Protein sequence | MTAIVGRLLT ALFLALIPVM AAMPGAVVAQ TTAPDAEIDY EAWEREAAAT EAVIEGARAS
TSLLETRRLE LVRWRAQFLA SDASNEERIA TIQSQIDALG PGPADGDVEP DAIADRRTAL
GEAMTAAQAP GLQAREAFNR ANGLIAEIDT ILLERQTQLL LERDPTPLNP ANWAIAINAL
VEFVRDQQRQ KGGLPQDPDS LLSAAETLPL LIFAVVVGLA LIVYGRPFVA RLGARFLDTD
RRRGRTALGF AVSLGQLLLP LVGFLVIILA LDLSGLLTED LDALAVAVGA LILSVYIALW
IAGRLFPDHE ERAAAFDIQM PARSQARRTI LFIGVFAGLA AFAEAVAAFD VIPPAARGVF
ILPAYAGLAW MFIRFGRLMR AARAEVEDGD SSNFGQRVVG LLTRALTVIA VVGPVLVVFG
YINAAEAIML PTVTTLLILG ILLVLQSVIR DLYAVLFRST VEAAADALLP VIVNFSLFVL
ATPLLALVWG VRPERLQEIY ARVLEGFTLG DTRITPGIVL AVLLVFAAGV LLTRILQGAL
KSTVLPRTKL DVGARNAVSA GVGYVGIALA CVIAVTSAGI DLTALGFVVG ALSVGIGFGL
QNVVSNFVSG IILLIERPIS EGDWIEVAGN MGIVKDISVR STTIETFDKT DVIVPNADFI
SGTVTNWTRG NTVGRVVLTV GVAYGNDTRR VADLLMEIAN GHDDVVSFPA PGVDFLGFGA
DSLDFRVRVI LRDINLFVTV QTELYHRINE TFVREGIEIP FAQRDVWLRN PETLQPLQSK
PEPQPQAGPS TPPQEA
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