| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1958 |
|---|
| Symbol | |
|---|
| ID | 3934409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1951311 |
|---|
| End bp | 1952672 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637904312 |
|---|
| Product | cysteinyl-tRNA synthetase |
|---|
| Protein accession | YP_509900 |
|---|
| Protein GI | 89054449 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.46476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.773483 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGAAA TCCACCTGAA GAATTCCAAG TCCCGCAAGG TCGAGCTGTT GCAGCCGATC
GAGCCCGGTC GCGTGTCGCT CTATCTCTGC GGGCCGACGG TCTATGACCG CGCGCATCTG
GGCAATGCCC GCTCGGCGGT CGTGTTCGAT CAGCTGTTTC GGCTGCTGCG CCATGTCTAC
GGGGCGGAAA ACGTGACCTT CGTGCGCAAC TTCACGGATG TCGATGACAA GATCAACGCA
CGCGCTTTGG CCGAGGGGCG GGAGATCGCC GATCTGACCG CCGAGACGTC GCAATGGTAT
CTCGATGACA CCCGCGCGCT CGGCGTGCTG GACCCCAACC ACATGCCCCG CGCAACCGAA
TATATCGCCG AGATGGTGGC CTTTATCGAG GATCTGATCG CCAAGGGCTT CGCCTATGCT
CGCGACGGCC ACGCGCTGTT TCGGGTGCGC AGTTTTGACG ATTATGGCAA GCTGTCGGGC
CGGTCGGTCG ATGACATGAT CGCAGGCGCA CGGGTGGAGG TCGCGCCTTA CAAAGAGGAC
CCGATGGATT TCGTCCTCTG GAAGCCGTCG TCGGACGATA TCCCGGGTTG GGACAGCCCG
TGGGGCAGGG GCCGCCCCGG CTGGCACATC GAATGCTCCG CCATGGCCCA CGCGCTGTTG
GGCGAGCAGT TTGATATCCA CGGCGGCGGC GCGGACCTGA TGTTCCCGCA TCACGAAAAC
GAGGTCGCCC AATCCTGCGC CGCAGGCCAC GGCTTCGCGA ATATCTGGAT GCACAACGAG
ATGTTGCAGG TCGAGGGCAA GAAGATGTCC AAGTCGTTGG GCAACTTCTT CACCGTGCGC
GATTTGCTCG ATCAGGGCGT GCCGGGCGAA GTGATCCGGT TTGTGATGCT ATCCACCCAC
TATGGCAAGC CGATGGACTG GACCGAGAAG AAGCGGGCGG AGGCGGAGGC GACGCTGCGC
AAGTGGTATG CCGCTTTGCG TCAGAGCGTC GCTGAACAAG AGGCGACACC GCACCTTGTA
GACTCTTTGG CCGACGACCT TAATACGGCC TTGGCCATCA CAACCCTGCA TGGAATGTAT
GAAACCGGTA ATTTTGGACC GCTTGCGGGT GGTTTGCGTT TGCTTGGCCT TTGGAGCGGA
ACCGTGCCGG ATTGGTCGGA GATAGCCGAG GTTGACCTGA CCTATTTCGC TGGCCGGTTT
TCTTCGGCGC GCGCCGAAGC GATGGTGACC AAAGATTTCA CCGACGTCGA CGCCCTCAAA
TCCGCCCTTA CCGCCGCAGG CGTAGAAGTC CGCATGTCCA AGGACGGCGT TGAGCTTGTT
CCGGGCCCAA CCTTCGACCC CGCCAAGCTG GAGGATCTGT GA
|
|---|
| Protein sequence | MVEIHLKNSK SRKVELLQPI EPGRVSLYLC GPTVYDRAHL GNARSAVVFD QLFRLLRHVY
GAENVTFVRN FTDVDDKINA RALAEGREIA DLTAETSQWY LDDTRALGVL DPNHMPRATE
YIAEMVAFIE DLIAKGFAYA RDGHALFRVR SFDDYGKLSG RSVDDMIAGA RVEVAPYKED
PMDFVLWKPS SDDIPGWDSP WGRGRPGWHI ECSAMAHALL GEQFDIHGGG ADLMFPHHEN
EVAQSCAAGH GFANIWMHNE MLQVEGKKMS KSLGNFFTVR DLLDQGVPGE VIRFVMLSTH
YGKPMDWTEK KRAEAEATLR KWYAALRQSV AEQEATPHLV DSLADDLNTA LAITTLHGMY
ETGNFGPLAG GLRLLGLWSG TVPDWSEIAE VDLTYFAGRF SSARAEAMVT KDFTDVDALK
SALTAAGVEV RMSKDGVELV PGPTFDPAKL EDL
|
|---|
| |