| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1950 |
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| Symbol | |
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| ID | 3934401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1942770 |
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| End bp | 1943903 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637904304 |
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| Product | ABC transporter related |
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| Protein accession | YP_509892 |
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| Protein GI | 89054441 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.303388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAACC TGAAACTCAC CGATGTCGAA AAGACGTATG GCGGAACCGT GCAGGTGCTG
CGCGACATCA ACCTGGACAT TGAACAGGGC GAATTGATCG TCTTTGTGGG CCCGTCGGGC
TGCGGCAAAT CCACATTATT GCGGATGATT GCGGGTCTGG AAAAAATCAC CGGCGGCGAG
TTGGTGATCG ACAACGATGT CGTCAATGAC GTTCCCCCGT CGGAGCGGGG CATCGCGATG
GTGTTCCAGT CCTACGCCCT TTATCCGCAC ATGACAGTGC GCGATAATAT GGCGTTTGCC
CTTAAGATTG CAGGCGATGA TGCGGCCACG ATCGACAAGA AAGTCAACGC CGCCGCCGCC
AAATTGCAGC TGGAAAATTT CCTCGACCGC CTGCCCAAGG CCCTGTCCGG CGGACAACGG
CAGCGGGTTG CCATCGGACG CTCCATCGTG CGCGATCCGA AGGTCTATCT GTTTGACGAG
CCGCTGTCGA ACCTCGACGC GTCCCTTCGC GTTGCCACAC GGATTCAGAT CGCGCAGCTC
AAGGAAGAGA TGCCCGAATC GACGATGATC TACGTGACCC ACGACCAGGT GGAGGCGATG
ACGCTGGCCT CGCGCATCGT GGTGCTGGCA GGCGGCGGCG TGGCGCAGGT GGGCAGCCCC
CTGACGCTCT ATGAAAAGCC AAATTCCACC TTTGTCGCCA AATTCATCGG CTCGCCCGCC
ATGAACCTTC TGGGCGGCAA GATCGTCGGA ACAGGCGCGG TCACGACGTT GCAGATGGAT
GAGGGGGGCG GCACGATCAC GTCCAACTAC CCCTCGACCG ATGCGGATAT GGGCGCGGTG
GTCGAAGTCG GCATCCGGCC CGAGGACATG GTGGAAACCG ACGCTTCCGA TTTCGCGTTT
CAGGGCAAGG TGGAGATCAC AGAGGCGCTT GGCGAAGTCA CGCTGCTGTA TTTCGAGAAG
TCCGCGCCCG AGAATGAGCC GGTCATCGGC AAGCTCGCAG GCATCCACAA GAACCTGCGG
GGCACGAATG TGAAGCTGAC CTCGGTGCCC GAGAAGGTCC ATGTCTTCAA GGACGGCGTC
AGCCTGCTCT ACCGCGATGA CAACGTGTTC CTGCCGGGCG TCCAGCCGCA CTAG
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| Protein sequence | MANLKLTDVE KTYGGTVQVL RDINLDIEQG ELIVFVGPSG CGKSTLLRMI AGLEKITGGE
LVIDNDVVND VPPSERGIAM VFQSYALYPH MTVRDNMAFA LKIAGDDAAT IDKKVNAAAA
KLQLENFLDR LPKALSGGQR QRVAIGRSIV RDPKVYLFDE PLSNLDASLR VATRIQIAQL
KEEMPESTMI YVTHDQVEAM TLASRIVVLA GGGVAQVGSP LTLYEKPNST FVAKFIGSPA
MNLLGGKIVG TGAVTTLQMD EGGGTITSNY PSTDADMGAV VEVGIRPEDM VETDASDFAF
QGKVEITEAL GEVTLLYFEK SAPENEPVIG KLAGIHKNLR GTNVKLTSVP EKVHVFKDGV
SLLYRDDNVF LPGVQPH
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