| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1948 |
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| Symbol | |
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| ID | 3934399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1939764 |
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| End bp | 1940984 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637904302 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_509890 |
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| Protein GI | 89054439 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.572214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAACA TTGCAGGACA GAAATCCGGC CTCTCCATCG TCACCAATGT CGCCGTGTTC
CTTATCGTGC TGGCATGGCT GATCCCGACC GTGGGCCTGT TCGTCAGCTC GTTCCGGGAC
CGCGACCAGA TCAGCGTTTC GGGCTGGTGG GAAGCGCCGT TCTCAGTAGA GCTGACCTAT
CGCACCCGGG CCGATGATAC GCCGACCCGC GATGGCGATC TGTACGTGGC GGAAGGCAAC
ATCTTCGAGA CCGGAGAGGT GCAGGATCAG TTCACCTCCG GCGCGAATTC CATCGCGGCC
TTCGGTCTGC GCGGCCGGGA GCCCGGGGCC TTTACAGCGG GCGAGACGGT GGACAACCGC
GACGGGGGCA CCGTGGTGGT GAATGCCGAC GGCTCCTACG TCTACACATC GCCGGAACCC
TTGGATGACA GGGGACCGAG GCTGTATTTC CTGGCGGAAT CGCCGCCTGA TTTCACCATG
TCCAACTATG CCGAGGTCTT GACCGGTCTG GACGAGGATG AACGGGCCCA GGAAATTGCC
ACGGGGGCCA CCTTCGGCGA GCTGTTGTTC GAGGAGGCGG GGATCTTCCG CAACTTCATC
AACACGTTGA CCGTGACGAT CCCGGCCACG ATCATCCCCA TCCTGATCGC GGCCTTTGCG
GCATATGCCT TGGCCTGGAT GGATTTTCCG GGGCGCGGGC TGATCATTGC CTGCGTCGTG
GGCCTGCTCG TGGTGCCGCT ACAACTTGCG CTGGTGCCGC TTCTCAACCT GCACAACCAG
GTGGGGATCG GGCAGTCGTT TCTGGGGATA TGGCTGGCCC ATACCGGCTT TGGATTACCA
CTGGCCGTGT ATTTGTTGCG AAATTACATG GTCGGCCTGC CGCGTGATAT CATCGAGTCG
GCCAAGGTCG ACGGTGCGAC GGATTTCCAG ATCTTCACCA AGATCATCCT GCCGCTGTCC
TTCCCGGCGC TGGCGTCGTT TGCGATCTTC CAGTTCCTGT GGACGTGGAA TGACCTGCTG
GTGGCCAAGG TGTTCTTGCC ATCGACCGGC GATGCGCAGG TGATGACCGT GAAGATCGCG
GACGATCTTC TGGGCTCTCG CGGGGGCGAT TGGGGGATTT TGGCTACGGC GGCGTTCGTG
TCCATCGCGA TCCCGCTGGT CGTGTTCTTC TCCATGCAGC GCTATCTGGT GCGCGGCCTT
CTGGCGGGAT CGGTGAAGTG A
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| Protein sequence | MDNIAGQKSG LSIVTNVAVF LIVLAWLIPT VGLFVSSFRD RDQISVSGWW EAPFSVELTY
RTRADDTPTR DGDLYVAEGN IFETGEVQDQ FTSGANSIAA FGLRGREPGA FTAGETVDNR
DGGTVVVNAD GSYVYTSPEP LDDRGPRLYF LAESPPDFTM SNYAEVLTGL DEDERAQEIA
TGATFGELLF EEAGIFRNFI NTLTVTIPAT IIPILIAAFA AYALAWMDFP GRGLIIACVV
GLLVVPLQLA LVPLLNLHNQ VGIGQSFLGI WLAHTGFGLP LAVYLLRNYM VGLPRDIIES
AKVDGATDFQ IFTKIILPLS FPALASFAIF QFLWTWNDLL VAKVFLPSTG DAQVMTVKIA
DDLLGSRGGD WGILATAAFV SIAIPLVVFF SMQRYLVRGL LAGSVK
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