| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1929 |
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| Symbol | |
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| ID | 3934380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1917140 |
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| End bp | 1918084 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637904283 |
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| Product | high-affinity nickel-transporter |
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| Protein accession | YP_509871 |
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| Protein GI | 89054420 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.495072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGGCG CGGCTGTCGC GCTGGTCGCG GCGGGCCTGG GCTTCTGGCT TTCGGGCGGG
GACCGTTTGG TGACGGCCTG GGCGCTGGAT GGGCAGAGAG AGGCCCAGGG GGCCATGGCG
GGCGCGCTGC GCCGCTTGCG CGCGGGGGAG GCGGCGGCGG TCGCCTCGCT CATGATTGTG
TGTTTCGGCT ACGGGTTCTT TCACGCGGTG GGCCCGGGCC ACGGCAAGCT GTTGATCGGC
GGTTATGGCG CGGCGCGAGA GGTGGGGGCC GTGCGGCTCT CGGCTGTGGC GTTGGCCTCC
AGCCTGGCCC AGGGGCTGAC GGCGGTGATG CTGGTGGGGG CGGGGGTCTG GCTGATCGGC
TGGGGGCGGG AGCGAATGAC GCAGATGGCC GATCAGGTCT TCGCGCCGCT GAGTTTCGCG
GCGATTGCGC TTGTGGGCCT GTGGCTGGTC TGGCGTGGGG CGCGAGGGCT TTGGCGATTG
CAGCGGATCG CGGCCCACGA CCATGACCAT GACCATCACC CCCATGACCA TGACCATGAC
CACGACCACG GTCATGGCCA CGGGGACGAC GGGGCGGTTT GCGGCAGCTG TGGCCATTCC
CACGGTCCAA GCGCCGAGGC GGTTGCCCGC GCGGCGGGTC CAAGGGAGGT CGCGGCCCTG
ATCGCGGCGG TGGCCATCCG TCCCTGCACC GGCGCGCTGT TTGTCCTGAT CCTCACGGCC
CAGATGGGCG TGTTCTGGGC GGGTGTGCTG GGCACATTGG CCATGGCGCT TGGCACCGCG
AGCGTGACCA TCCTGGTGGC GGTGGCCGCC GTCGGGCTGC GGCGCAGTGC GCTGGCGGGT
TTGGCCGACA GCCCGATATT GGCGCGGGCG CAACCGATCC TGGAGCTTGC CGTGGGGGCC
TTGGTCGCGG TGCTGGCCAC ACACCTTGCT TTGGCCGCAT TGTAG
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| Protein sequence | MVGAAVALVA AGLGFWLSGG DRLVTAWALD GQREAQGAMA GALRRLRAGE AAAVASLMIV
CFGYGFFHAV GPGHGKLLIG GYGAAREVGA VRLSAVALAS SLAQGLTAVM LVGAGVWLIG
WGRERMTQMA DQVFAPLSFA AIALVGLWLV WRGARGLWRL QRIAAHDHDH DHHPHDHDHD
HDHGHGHGDD GAVCGSCGHS HGPSAEAVAR AAGPREVAAL IAAVAIRPCT GALFVLILTA
QMGVFWAGVL GTLAMALGTA SVTILVAVAA VGLRRSALAG LADSPILARA QPILELAVGA
LVAVLATHLA LAAL
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