| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1928 |
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| Symbol | |
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| ID | 3934379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1916472 |
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| End bp | 1917140 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637904282 |
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| Product | hypothetical protein |
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| Protein accession | YP_509870 |
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| Protein GI | 89054419 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3683] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.449799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTGC CCGCGCCCGC CCCCCGACTC GCCGTGCCTG CCCTGGCCGC GCTGTGCATC
GGGCTCTGGC CGTCGGCGCC CGCCGCCCAT CCGCATATCT TCGTCGATGC CGGTCTGCGC
CTTGTGATGG TGGGGGGCAC GGTGACGGCG GTTGAGGTGA CCTGGCTATA CGATGAGCTA
TACACCTTGA TTTTGCTGGA GGATTACGGA TTGGACCCGG ATTTCGATCT GGTCCTTACG
GAGGCGGAAA TCGCCGCGAC GCTGGGGTTT GACCTGAACT GGTCCCATGG GTTTGAAGGG
GGGCTGATCA TGCATCGCGG CGACGCGGAG CTGGAGCTGG GAGACCCGTC GCCGGTGTCG
CTGGAATTGG TGGGAGAGGG GCAGATCCGC ACCACCCACC GCCGCGCGGT CATTGATCCG
GGCGGCGCGG AGGCGCTGGT GGCGCAGGTC TATGATCCGG AGTTCTACGT GGCCTTCGAG
ATGATAGGCG AGATGGTGGT GGAGGGCGCA CCCTGCACGC CGGAGTTGAT CCGCGCCGAC
CTTGATGCGG CCTATGCCGG GCTGGAGGCC GCGTTGGACG CCATCGGTGG CGTGATCGCG
GCGGAGGATA ATTTTCCGCG AGTGGGCGGG CTGTTCGCGG ACCGGGTGGT GTTTGAATGC
GCTGGCTGA
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| Protein sequence | MSLPAPAPRL AVPALAALCI GLWPSAPAAH PHIFVDAGLR LVMVGGTVTA VEVTWLYDEL
YTLILLEDYG LDPDFDLVLT EAEIAATLGF DLNWSHGFEG GLIMHRGDAE LELGDPSPVS
LELVGEGQIR TTHRRAVIDP GGAEALVAQV YDPEFYVAFE MIGEMVVEGA PCTPELIRAD
LDAAYAGLEA ALDAIGGVIA AEDNFPRVGG LFADRVVFEC AG
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