Gene Jann_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1908 
Symbol 
ID3934359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1896759 
End bp1897799 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content65% 
IMG OID637904262 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_509850 
Protein GI89054399 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.44511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTCG AGATCCGAAT TGAAGGGCGC GCGGGGCGGA TCACGCTGAA CCGGCCCAAG 
GCGCTGAACG CGGTGACCTA TCAGATGTGT CTGGCGATTG AGGCGGCCCT GGATGCCTGG
GCCGGGGACG ACGCTGTGGA CCTGGTGATG ATCGACGCCG CTGGCGAGCG GGCCTTCAGC
GCGGGCGGCG ATATTCAAGA GATGTATGAC ACCGGCATGG CGGGTGACTT CGCCTATGGT
CGCCGGTTCT GGGCCGACGA ATACCGGATG AACGCCAAGA TGTTCGCGTT TCCGAAGCCT
GTCGTGACGT TTTTGCAGGG CTTCACCATG GGTGGCGGCG TGGGTGTCGG CTGCCACGGG
TCGCACCGGA TCGTGTGCGA AAGCTCAACG ATCGCGATGC CGGAATGCGG GATCGGGCTG
GTGCCGGATG TCGGTGGCAC GCTTCTGTTG GCGCGCGCGC CGGGGCGGTT GGGGGAATAC
CTGGGCGTGA CGGCGGCGCG GATGGGTCCG GGCGACGCCA TCTTCGCGGA GTTTGCTGAC
TATTATGTGC CTGAGGCGGA GTGGGCAGCG TTGAAAACTG ACCTCCTGAC CGGGGACTGC
GACGCCGTCG ACCGAGCCGC GAAGACGCCC CCTCCCAGCA CATTGGCCGC GCAAAGGAGG
GCGATTGACC ACCTCTTTGG CGGCGAGACC CTGCGCGATC TGCTGGTGGA TCTGGCCCAT
GCGCCGGACG ACATGGCGGA CTTTGTGGCG GCGACGCACA AGATGATGGG CCGAAACGCG
CCGCTGTCCA TGGCCTGCGC CATCGAGTTG GTGCACCGCG CCCGGACCCG AGACGATATG
GAACAGGCCC TGCGCAATGA GTATCGCTTC ACCGCGCGGT CGATGGAGCA CGGGGATTTT
CTGGAAGGCA TCCGGGCCGC AATTATCGAC AAGGACCGTA AGCCGGTGTG GAAGCACAAG
GCGCCCGGCG ATGTGACATT GGCTGAGGTG GCGGCGATGT TGCGCCCGCT GGGGCCGGAT
GAATGGAGGA TGAGCAAATG A
 
Protein sequence
MDVEIRIEGR AGRITLNRPK ALNAVTYQMC LAIEAALDAW AGDDAVDLVM IDAAGERAFS 
AGGDIQEMYD TGMAGDFAYG RRFWADEYRM NAKMFAFPKP VVTFLQGFTM GGGVGVGCHG
SHRIVCESST IAMPECGIGL VPDVGGTLLL ARAPGRLGEY LGVTAARMGP GDAIFAEFAD
YYVPEAEWAA LKTDLLTGDC DAVDRAAKTP PPSTLAAQRR AIDHLFGGET LRDLLVDLAH
APDDMADFVA ATHKMMGRNA PLSMACAIEL VHRARTRDDM EQALRNEYRF TARSMEHGDF
LEGIRAAIID KDRKPVWKHK APGDVTLAEV AAMLRPLGPD EWRMSK