| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1898 |
|---|
| Symbol | |
|---|
| ID | 3934349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1885825 |
|---|
| End bp | 1887702 |
|---|
| Gene Length | 1878 bp |
|---|
| Protein Length | 625 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637904252 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_509840 |
|---|
| Protein GI | 89054389 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3211] Predicted phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.62493 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.392483 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACA TCGATACGAG CGATTTGAGC TGGGATGATT GGGACGAGCG GGTGCGCCCG
GCCCCGGAGG TGACGGATTT CGACCGCGTA GTGGAGACGG CCATGACACG CCGCGGCGTG
CTGGGATCGC TGGTCGCGCT GGGGTCCGGG GCTGCGGTGA TGGGCACGGG GCTGCTGCGC
GCCACGACCG CGATTGCAGA TGGTCAGATA AACTTCGCGT TCCAGCCGAT CCCGATTTTC
ACCGACAACA CGGTCCATGT GCCCGACGGC TATACCTGGA GCACCGTCGC GCGATGGGGC
GACCCGCTGT TCTCGGGCGC GCCGACGTTC GACAATGGCC ACGGCGTCGA CGGCTCTGAC
AGGATTTTCG GCGAGAACAC CGACGGGATG GAATTGTTCC GCGTGGGCGA GGCCGAGGTC
ATCACGGTCA ACCATGAATA TGTGAACCCC GCGATCAACA TCCCCGAGCG CGAGACGCCG
ACCGAAGACG ATGTGATGAC GTTGATGAAC CTTCAGGGCG TCACGGTCAT GGAAGTGGCG
CGGGGCGAGG CGGGATATGA GGTTGTCGTC GACAGCCCGC TCAACCGTCG CATCCACCAC
AACACGCCGA TGACCCTTGC GGGACCCGCT GCCGGGCACC CGCTGCTGCA AACCGCCGCC
GATCCGTCGG GGACAGAGGT GTTTGGAACG ATGAACAATT GCGGGTCGGG CCGTACCCTG
TGGGGCACCT ATCTGACCTG CGAAGAAAAC TTCAACGGCT ACTTCGGCTC CACCGATGCG
GATCTGGACC TGCCCGAGGG GTTCGACCGC TATGGCATCG ATCATGAGAG CCGCTATGCG
TATGAGCTGT ATCATGCGCG CTATGATATC AGCCAAGAGC CCAATGAAGC GCATCGCTTT
GGGTATATCG TAGAAATTGA TCCCGCCGAT CCGACGTCTC AGCCAGTAAA GCGCACAGCA
CTTGGGCGCT TCAAGCACGA GAATGCGGCC ATGACCCTGG CCGAGGATGG CCGTGTTGTC
GTTTATATGG GCGATGATGA ACGCGGGGAG TTCATGTATA AATATGTGTC GAACGGCACC
TATACCGACG GCGGCCCCAC CGACGGCCTG CTGGATGACG GCACGCTCTA CGCCGCCTAT
TTCAGCGCGG ACGGCACCGG GGAATGGCGC GCGCTGACGC CCGACACGAC GCAGATGGAT
GCCGCGATGA TCTGCATCCA CACCCGTCAC GCGGGATCGA GCGTCGGGGC GACCACGATG
GACCGGCCTG AGTGGGTGGC GGTGTCTACC ACTTTGGCCG AGGCCTATTG CTGCCTGACC
AACAACTCGC GCCGGGCCGA AGGGTTCACC AACGCCGGGG GCGATCCGGC AGAGCCCGCG
CCCGGCACCC CGAACCCGCG CGCGGAAAAT CGTTACGGGC AGATCGTGCG CTGGCGACCG
GATGGCGAAG ATCACGGGGC CGACACGTTC ACCTGGGATC TTTACGTGAT GGCAGGCAAC
CCGGTTGTGG GTCTGGGCCT TTATGCGGGG TCCGACAATG TGACCGAGGG CAATATGTTC
AACTCGCCCG ACGGCATGCA GGTCGACAGC ACCGGGTTGA TCTGGATCCA GACCGACGGC
GACGACAGCA ATGAGGGCGC GTTTACCGGC ATGGGCAACA ACCAGATGCT GATCGGTCAC
CCCGAAACCG GTGAGATCGC CCGCTTCCTA ACCGGCCCCA GCGGCAGCGA AGTCACCGGC
CTGACCTGGA ACAGTGACCG CACGGTGGCG TTTGTGGGCA TTCAGCACCC TGGCGGCACC
TGGCCCGATG GCGGCGACAG CCTGCCCCGG TCCTCCGTGA TCGCGGTCTG GCGCGATGAT
GGCGCTGCAA TCGGCTGA
|
|---|
| Protein sequence | MKDIDTSDLS WDDWDERVRP APEVTDFDRV VETAMTRRGV LGSLVALGSG AAVMGTGLLR
ATTAIADGQI NFAFQPIPIF TDNTVHVPDG YTWSTVARWG DPLFSGAPTF DNGHGVDGSD
RIFGENTDGM ELFRVGEAEV ITVNHEYVNP AINIPERETP TEDDVMTLMN LQGVTVMEVA
RGEAGYEVVV DSPLNRRIHH NTPMTLAGPA AGHPLLQTAA DPSGTEVFGT MNNCGSGRTL
WGTYLTCEEN FNGYFGSTDA DLDLPEGFDR YGIDHESRYA YELYHARYDI SQEPNEAHRF
GYIVEIDPAD PTSQPVKRTA LGRFKHENAA MTLAEDGRVV VYMGDDERGE FMYKYVSNGT
YTDGGPTDGL LDDGTLYAAY FSADGTGEWR ALTPDTTQMD AAMICIHTRH AGSSVGATTM
DRPEWVAVST TLAEAYCCLT NNSRRAEGFT NAGGDPAEPA PGTPNPRAEN RYGQIVRWRP
DGEDHGADTF TWDLYVMAGN PVVGLGLYAG SDNVTEGNMF NSPDGMQVDS TGLIWIQTDG
DDSNEGAFTG MGNNQMLIGH PETGEIARFL TGPSGSEVTG LTWNSDRTVA FVGIQHPGGT
WPDGGDSLPR SSVIAVWRDD GAAIG
|
|---|
| |