| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1830 |
|---|
| Symbol | |
|---|
| ID | 3934279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1816772 |
|---|
| End bp | 1817512 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637904182 |
|---|
| Product | Asp/Glu racemase |
|---|
| Protein accession | YP_509772 |
|---|
| Protein GI | 89054321 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3473] Maleate cis-trans isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.289477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGCT TGCCCTACAC CTTGTCGACG CATCGCCCGT CCCAGCTTGG CATGATCGTG
CTGCAATCCG ATGAGACGGT GGAGATGGAT CTGCGGCATC TTTTGCCGAC GGAGGCAGAG
CTTCTGGTGA CCCGTATCCC GTCCTCCCCC ACCGTCTCAT CGGACGGCCT GGGCCAGATG
GAGCGGGATG TGACGGGTGC GGCAAGCCTG TTGCCACGGG GTGCGCGGCT GTCCGTCGTC
GGGTTCGGCT GCACCTCGGG CACGGCGCAG ATCGGGGCGG CGCGGATCGC GGACCTGACC
CGCAAGGGGG TTGAGACGGC TGCCGTGACC AATCCCGTCT CCGCCCTCAT CGCCGCTTGC
GCGCATCTGG GCGTCACGCG TCTGGCACTG GTCAGCCCAT ACGTTGAAGA GGTCTCACAC
CGCCTGATGG AGGTTTTGGC GGAGGCGGGC ATCACCATCG CCGCCTTCGC GAGCTTCAAT
GAGGCCCGGG AGGACCGCGT TGTGCGCATC GCGCCGCAGG CGATTGTGGA TGCGGCTCGG
GCAACGGCGG AGGACGCGCC GTGTGATGCG GTCTTCCTGT CCTGCACCAA CATGCGCACG
TTGGATGTGA TCGCCCCTAT CGAGGCCGAA TTGGGCCTGC CAGTCCTGTC CAGCAATCTG
GTGTTGGCCT GGCATATGGC GCGTCTGGCG GGCGTGAGCG GGCCTTTGGG CATTGATGCC
GCGCTGACCC GGGCGCGCTA G
|
|---|
| Protein sequence | MKSLPYTLST HRPSQLGMIV LQSDETVEMD LRHLLPTEAE LLVTRIPSSP TVSSDGLGQM
ERDVTGAASL LPRGARLSVV GFGCTSGTAQ IGAARIADLT RKGVETAAVT NPVSALIAAC
AHLGVTRLAL VSPYVEEVSH RLMEVLAEAG ITIAAFASFN EAREDRVVRI APQAIVDAAR
ATAEDAPCDA VFLSCTNMRT LDVIAPIEAE LGLPVLSSNL VLAWHMARLA GVSGPLGIDA
ALTRAR
|
|---|
| |