Gene Jann_1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1823 
Symbol 
ID3934272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1812286 
End bp1812705 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content62% 
IMG OID637904175 
Producthypothetical protein 
Protein accessionYP_509765 
Protein GI89054314 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.249624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGC CCTCCCTGAT CCGCGAAGTG GAAGACCTTG AACGGCTGGC CAATCAGCTC 
GACAGCGCCT TTCGCATCCC CGGCACATCG TTCCGCGTCG GCTATGATGC CATCGTCGGG
TTGGTCCCCG GGGTCGGCGA TGCGCTGACT TTCGCGCCGT CCGCTTATAT CGTGTGGAAG
GCCCATCAAT TAGGTGTGGG CTGGCCGCGT TTGCTGCGGA TGAGCGCCAA TGTCGCCGTC
GATACGATGA TTGGCGGCAT CCCCCTGTTA GGCGATGTCT TCGACGCGGC GTTCAAGTCC
AACCGCCGCA ATGTGGCGCT CGTCCGTGAT TTTGCGGAGC GCGAAACAAT CCCCACGATC
TACGAAAAAG GGCCGCGCAA CAGCACGGCC CGAATTCATC ACACGGCGGT GGCCGTCTAG
 
Protein sequence
MAQPSLIREV EDLERLANQL DSAFRIPGTS FRVGYDAIVG LVPGVGDALT FAPSAYIVWK 
AHQLGVGWPR LLRMSANVAV DTMIGGIPLL GDVFDAAFKS NRRNVALVRD FAERETIPTI
YEKGPRNSTA RIHHTAVAV