| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1821 |
|---|
| Symbol | |
|---|
| ID | 3934270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 1811074 |
|---|
| End bp | 1811580 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637904173 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_509763 |
|---|
| Protein GI | 89054312 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.912712 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.374512 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGTT CTATTGAGCC GCTTTATATT GCGGACCTGT CGCTCTTCAC CAAATCCCTG
CGTGCGTCGC TGGAGGCGCA ACCCGGCCCC GCCGCCGTCG GCCAGGCCAA GATGATGGAC
CTGATCGCCA AGGCGGCGGG GTATCGCAAC CAGCAGACCC GCCGTGCCGC CACCCCTGCC
CCGCAGCCCA CGCCCCGACT TGGCCGCGCC CTGCGCTGCT TTGACGAGGA CGGTCAAATG
ATCCGCTGGC CGAAGCAGAC CATGGTGCAG GTGCTGTGCC TGTGGGTGAT GTGGCACCAT
TTGCCCGCCC GGCGCGACCT GTCCGAGCCC GAGGTGAACG CCATCCTCAA CGCCCACCAC
AGCTTCGGCG ACCACGCGCT TCTGCGCCGG TCGCTGGTGG ATCACGGGCT GATCACCCGA
ACCCGCGATG GCCGCGTCAA TCGCCGGATC GAGCAGCGCC CCCCCGATGA CGCGCGCGCC
CTGATCCAGG CATTGGCCGG GCGGTAA
|
|---|
| Protein sequence | MTRSIEPLYI ADLSLFTKSL RASLEAQPGP AAVGQAKMMD LIAKAAGYRN QQTRRAATPA
PQPTPRLGRA LRCFDEDGQM IRWPKQTMVQ VLCLWVMWHH LPARRDLSEP EVNAILNAHH
SFGDHALLRR SLVDHGLITR TRDGRVNRRI EQRPPDDARA LIQALAGR
|
|---|
| |