| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1714 |
|---|
| Symbol | |
|---|
| ID | 3934162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 1696556 |
|---|
| End bp | 1697014 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637904065 |
|---|
| Product | paraquat-inducible protein A |
|---|
| Protein accession | YP_509656 |
|---|
| Protein GI | 89054205 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.400974 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.677106 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAGA TCCTCATCGC CGCCAATATC TGCCTGTTGA TCGCCTTCCC CGTCTCCTGG
GCCGCGCCGC TGATGCGGGC GGGTCTGTTG CCGCTGTTTG GTCTGTCGGA GATCTCGGTC
CTCTCGGGCC TGAGCGCGCT TTGGGGCGAT GCGGAATATG CGCTGGCGGC GCTCGTCGCC
CTCTTTGCGC TGGTCTCTCC GATGGTCAAA ACCATCGTTC TGACCCTGAT CCACCTGTCG
AAAGCCCCTG TCCGCCTGCT GCCTGCGCTG GAGATCGCGG GCAAGCTGGC GATGGCGGAT
GTGTTCCTGA TCGCGGTCTA TATCACGCTG GCCAAGGGGC TATCCGTGGG CCGGGTCGAG
ACGGCCTGGG GGCTGTGGCT GTTCACCGGC TGTGTGCTGG TCTCTCTGGT GATCTCGATC
CTGACCAAAC GCGCGCTCAC GCCCCGTGCT CAAGGTTGA
|
|---|
| Protein sequence | MTKILIAANI CLLIAFPVSW AAPLMRAGLL PLFGLSEISV LSGLSALWGD AEYALAALVA
LFALVSPMVK TIVLTLIHLS KAPVRLLPAL EIAGKLAMAD VFLIAVYITL AKGLSVGRVE
TAWGLWLFTG CVLVSLVISI LTKRALTPRA QG
|
|---|
| |