Gene Jann_1676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1676 
Symbol 
ID3934124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1660015 
End bp1661238 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content64% 
IMG OID637904027 
Producthypothetical protein 
Protein accessionYP_509618 
Protein GI89054167 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGCG CCCCCCTCTT GGCATCTGTT GCCGCGTTAA CCCTCATATC CGCGCCCCTG 
TCCGCGCAAA CCGTCGACGC CCAACGCCAG GCCGTGTTCC AGCAAATGCT CTCGGACCCC
GGCAACCGCG AGCTGATGCG GGATTATGCC CGCCTGTCGG TGGAGGCCCG CGATTTTGAG
GCCGCCGCCG CCACGCTGGA GCGTCTCGTC GATCAGGAAC CCGAAAATGT CAGCGCCCGG
GTGGAGCTGG CCGTGGCCTA TTTCGCCCTC GGCTCCTACG CGGTGGCCGA GTATCATCTG
GCGGCGGCTG AGGCCTCTGG CGCGCTGGCA CCCGCTCAGG CCGCGCAAGT CGCCCGCTAC
CGCGAAGAGG CCCAGGACCG CGACGACGGA TCAGCCTACT CTGGCCGTCT GGCCGTCGGA
TATGCCTATG CCGACACCTC CGACGAAAGC GGCGCCTTTG TCAGCGGCTC GGTCGACTGG
CGCCTCGATC TGGGCAATGC TAATGTCACG CAATGGGTCA CCGAGTTTGC CTTCACCAGC
TATCAGCCGG GCGACGCCTC CATCAACGGG CGCAATGTGG CGCGCCTGCG CACGGGTCCT
GAATGGCGGC TGTCGGGCGA TGCATACGGG CCGCGCCTGC AAGCCTACGG TGAACTGGAA
TATTTCCAGA ACGACGATCT GCTGCCGGGC GATTATACGT CGTGGGCCGC GGGCCTCGCC
TACGCGAACC CGATCAATGA GATGATCACG GTCTACGCCG ACCTCAGCAC AGGCCGTGAA
GTGGCAAACG ATGCTGCGGA TGCGGACTTC GACTTCACCG AATTTGATCT GGGCATCACC
TACCGCCCCT CTCGCGACAC GCGCCTGCGT CTGTCCGGCA CGTGGAACAC GCGCAATCAG
GTCGACGCCG CAACGCCCTT TGACTTCACC GGGTCCGCTA TCCGCCTGTC GGCGCAGCAT
GCCTTTGATA TCGGGTGGGA GGCCTTGCCA AATCGCTGGG TTGTGGGCGC GTTCGCCGAG
GCGGGCCAGC TGGAGCGCAA CGACGCCGGC ACGATCACCG AGTTCGACGA ACAAAGCTAT
GGCGTGTTGC TGCGGGCCTT CGTCTTTGAA GACATCTTCA TCGAAACCGC CGCCGCGCAG
GTCAATGAAG ATACTCTGTC GGGCGGCACC ACCACAACGC GCGAAGAGAT GATTTACACG
TTCCAAGTCG GTTGGGAGTT CTGA
 
Protein sequence
MFRAPLLASV AALTLISAPL SAQTVDAQRQ AVFQQMLSDP GNRELMRDYA RLSVEARDFE 
AAAATLERLV DQEPENVSAR VELAVAYFAL GSYAVAEYHL AAAEASGALA PAQAAQVARY
REEAQDRDDG SAYSGRLAVG YAYADTSDES GAFVSGSVDW RLDLGNANVT QWVTEFAFTS
YQPGDASING RNVARLRTGP EWRLSGDAYG PRLQAYGELE YFQNDDLLPG DYTSWAAGLA
YANPINEMIT VYADLSTGRE VANDAADADF DFTEFDLGIT YRPSRDTRLR LSGTWNTRNQ
VDAATPFDFT GSAIRLSAQH AFDIGWEALP NRWVVGAFAE AGQLERNDAG TITEFDEQSY
GVLLRAFVFE DIFIETAAAQ VNEDTLSGGT TTTREEMIYT FQVGWEF