Gene Jann_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1536 
Symbol 
ID3933984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1507236 
End bp1507841 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content61% 
IMG OID637903887 
Productphage integrase 
Protein accessionYP_509478 
Protein GI89054027 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.26915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAA TGCGCCTCTA CGACGACCAT GGAAACCGCC TCTATCTGAA TGCAGATGAG 
AGGGCGGCGT TCTTGGCTGC GGCCCGTCAG AGGCCAGCCC GCGACCGCAC CCTTTGCGAA
ACCCTCCATT TCACAGGCTG CCGTCCGTCC GAGCTGATCG AGATCACTGC CGCCCGCGTC
GATCTATCCG GTGGCACCTT GGCGATTCGG TCGCTGAAGA AGCGACGGAA TGGGGCAGGG
GAGGTCAGGG TGGTCTTCAG GACGGTTCCT GTGCCACCTG ACTACCTGGA CACGCTCAAC
ACGGCCCACG GCATCCGTGA GGCACAGAAA TCGCCCAAAC GGGCAGGGGA GCCCATCTGG
CCGATCAGCC GTGTGCATGT TTGGCGGATC GTCAAGGGCG TTATGATCGA GGCGGGCCTC
CCCGATGCAC CTCAGCGAAC GCCAAAGGGT TTACGCCATG GCTACGGGAT CAATGCAATC
GTGAACGGCA TTCCGCTCCA CATGCTGCAA AAGTGGCTTG GCCACGCGCA GCTTTCCACG
ACGACGATCT ACGCCGATGC CATCGGCAAG GAAGAGCAGG ACCTCGCGTC TAGGATGTGG
GGATAG
 
Protein sequence
MSEMRLYDDH GNRLYLNADE RAAFLAAARQ RPARDRTLCE TLHFTGCRPS ELIEITAARV 
DLSGGTLAIR SLKKRRNGAG EVRVVFRTVP VPPDYLDTLN TAHGIREAQK SPKRAGEPIW
PISRVHVWRI VKGVMIEAGL PDAPQRTPKG LRHGYGINAI VNGIPLHMLQ KWLGHAQLST
TTIYADAIGK EEQDLASRMW G