| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1534 |
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| Symbol | |
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| ID | 3933982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1504756 |
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| End bp | 1505916 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637903885 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_509476 |
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| Protein GI | 89054025 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00802449 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.276837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGAGT TCCTGATTAT AGAAGATGAA GCGGAAAAGC GGTCATCAAT CGAAAATGAG
ATACGTGCAT ACTTTGGCGA TCCAGGCATC CAGTTTTGCG TTGCTCAGAC ATTTGCTGAG
GCTGCCAAAC TAATCTTCGA ACGGCGTTTT GACCTTATTG TAACAGACTT GATGCTACCG
CGACGAAAGG GTGATGAGCC GTCCGACTTT TCAGACAATC TTCTAGATTT CTTGAGCAGC
AGTTCTTTAA ATTCTAGCGC AGTCGTTGTC GCAATTTCGC AATTTGGTGA CTTGATCGAA
AGACAAGCTA CAAGCTTCAA GCGCCTTGGT ATTTTTCTGC TTGACTACAA TAACCAGTCA
GATTGGCGGA CGTGTTTGAA AGTCTGCTTG CAACGAGTTG AACACAAACA AACAGTTGAT
TTTGCCATCA TATGTGCTCT TGAAGAAGAG CGAGTGGGTT TTCGAGAAGT CGAAGGCGAT
GCGACGTTTG GTGAGCTCTC ACGGTACCAC GGTTTGGATT GTCGAGACAT ATCCATCGCA
GGTTTCAATG GAATTTGTGT TGTCCAGCCG CGTATGGGCT TAGTCGACGC TGCTGCAATC
TGCTCTCAGA TCCTTTCACT GTTTCGCCCC AGACTAATAT GCATGGCAGG CATTTGTGCT
GGGTTTGAGG GCGAAGTTGA ACTTGGAACC TTATTGGTTT CTGACCCATC TTGGGAACAT
CAATCTGGAA AATGGAAGGG CGAAGATTTC AAGTTGTCGC ACTATCAAGA GCCCTTGCAA
AACAGCGTTC GAACGATACT CAGCCAGGTC ATTGAAGAGG ACCCCACCTG CCAGAGTCTG
ACTTCCGACC TACCTGAATT ATATCGCTCG TTGGAACGAG CAGCTGCAAT CATGCCAACA
GTCTCGGGTT CTGCGGTAAT CGCATCAAGT GATAAGGCAA GTGAAATCAG GGAACAGCAT
CGCAAAGTAG GAGGCCTAGA TATGGAAGTT TATGGGCTGT ATCGCGCCGC GGCTATTCAT
TCTGATAGCA TAAGCTGCTT TGCGGCGAAG ACCGTCGTTG ACCTTGCGAA CGAAGCAAAG
GGCGATGACC TGCACCATGC AGGTGCAGTT TTTTCTGCTC GTTTCGTCGC AAAGGCAATC
CATCGAATTC TAAGTGATTG A
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| Protein sequence | MAEFLIIEDE AEKRSSIENE IRAYFGDPGI QFCVAQTFAE AAKLIFERRF DLIVTDLMLP
RRKGDEPSDF SDNLLDFLSS SSLNSSAVVV AISQFGDLIE RQATSFKRLG IFLLDYNNQS
DWRTCLKVCL QRVEHKQTVD FAIICALEEE RVGFREVEGD ATFGELSRYH GLDCRDISIA
GFNGICVVQP RMGLVDAAAI CSQILSLFRP RLICMAGICA GFEGEVELGT LLVSDPSWEH
QSGKWKGEDF KLSHYQEPLQ NSVRTILSQV IEEDPTCQSL TSDLPELYRS LERAAAIMPT
VSGSAVIASS DKASEIREQH RKVGGLDMEV YGLYRAAAIH SDSISCFAAK TVVDLANEAK
GDDLHHAGAV FSARFVAKAI HRILSD
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