Gene Jann_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1533 
Symbol 
ID3933981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1504314 
End bp1504763 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content49% 
IMG OID637903884 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_509475 
Protein GI89054024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0503876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.244414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAC TTCTTGTCGA GGATGATGAG TATAAGCAGA CCAAGGTTGA GGCTGCCCTA 
AGAAGCGTTG CTTCCGAACT GGACCTTGTA GTAGCAAAAA CTGTTCGAGA TGCCGTTGGC
TGTATGCAGG GCGACGGATA TGACCATATT GTCTTAGACA TCGCTTTGCC TAGCCACGGC
CAAGTTCCTG GTGGCGGAGC AGGGTTGCCA ATGCCAGCAG GAGGGATCGA AGTCTTGCTC
GAAATCTCTT ACCAGTCTCG GCATGACCCC GTTACAATTC TCACTCAATA CCCTGAGATC
GAGTATGATG GAAAGCTGGT CGATCTTACT CGTGCGCGGC GTTTCTTACA AAAAAACATC
CAAGCAACCA TCATCGACGT CATTCACTTC GAGATGGACA ACGAACTTTG GAAACACCAG
TTAAAAAAGG CGATTTCTGG ACGTGGCTGA
 
Protein sequence
MKVLLVEDDE YKQTKVEAAL RSVASELDLV VAKTVRDAVG CMQGDGYDHI VLDIALPSHG 
QVPGGGAGLP MPAGGIEVLL EISYQSRHDP VTILTQYPEI EYDGKLVDLT RARRFLQKNI
QATIIDVIHF EMDNELWKHQ LKKAISGRG