| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1511 |
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| Symbol | |
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| ID | 3933958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1481385 |
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| End bp | 1482071 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637903861 |
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| Product | condensin subunit ScpB |
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| Protein accession | YP_509453 |
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| Protein GI | 89054002 |
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| COG category | [K] Transcription |
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| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
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| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.340191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGGACA CGCCGAAGCA AACCGAGGAA AGCCTGTTTC GCGCCCCCCC ACTGGCGGAA
CAGGAACGCA TGGTGGAGGC GCTTTTGTTC GCCTCGGCTG ATCCCGTCAG TCTGGCGGAG
ATGGAAGCGC GGATGCCCCA CGGATCTGAC CCGGCGGAGG CGCTGTTTTT GCTGCGCAAA
CGCTATGAAG GGCGCGGCGT TCAGGTCGCG AAGGTCGGCG ATAACTGGGC GTTTCGCACC
GCGGCCGACC TGGGATTTCT GATGGCGCGC GACCAGGTGG AGCAGCGCAA ACTGAGCCGT
GCGGCCATTG AGACGCTGGC CATCATTGCC TACCACCAAC CCGTCACACG GGCAGAAATT
GAGGAAATTC GCGGTGTTAG CGTCAGTCGC GGCACGATAG ACCAGCTGAT TGAGCTGGAT
TGGATCAAGT TCGGCCGCCG TCGCATGACG CCCGGGCGGC CTGTCACCTA TGTGGTCACG
CAGCTGTTTC TGGATCATTT CGGGCTCGAA TCCGCGCGCG ATTTGCCGGG TCTCAAGGAA
CTCCGTGACG CGGGGCTGCT CGAATCCCGT CCGCCCGATG CTGACGACGG AGCGGAACCG
CGCGATGAGA ATACGTCGGA CATGTTTGAC GACGACGCGG ATGCCTCGCT GGACGACGAT
AGCCCGCTGT TCGAGGACGA CGCCTGA
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| Protein sequence | MTDTPKQTEE SLFRAPPLAE QERMVEALLF ASADPVSLAE MEARMPHGSD PAEALFLLRK
RYEGRGVQVA KVGDNWAFRT AADLGFLMAR DQVEQRKLSR AAIETLAIIA YHQPVTRAEI
EEIRGVSVSR GTIDQLIELD WIKFGRRRMT PGRPVTYVVT QLFLDHFGLE SARDLPGLKE
LRDAGLLESR PPDADDGAEP RDENTSDMFD DDADASLDDD SPLFEDDA
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