| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1474 |
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| Symbol | |
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| ID | 3933921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1443259 |
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| End bp | 1444635 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903824 |
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| Product | cytosine deaminase-like protein |
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| Protein accession | YP_509416 |
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| Protein GI | 89053965 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.534855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCA AGACGCTCCC CTCTGACAAT CTGCGGTTGG AGAACGTGAC GATTCCTGGG
TGCCTGATCG GGCAATCGGG CGTTGTGCGC ACAGCGCTGA GTATCGCCGA CGGTGTGATC
GCCGCGAGTG GTGGCACGCC GGTCGATATG AGGGGGGCGA TGGTGTTTCC CTGTTTCGTC
GACATGCACA CGCATCTGGA CAAGGGCCAT ATCTGGCCCC GCTCGCCCAA TCCCGACGGC
ACGTTCATGG GGGCGCTGGA GACGGTGCGC GCAGACAAAT CGGGGCGGTG GGACAGTGTT
GATCTGCCGC CGCGCATGAA TTTCAGCCTG AACTGCGCCT ACGCCCACGG CACGCGGGCC
ATTCGAACCC ATCTGGACTA TTTTGGAGAG ACTGACGAGG CGCGGGTCAG CTGGGACGTC
TTCGCACAGA TCCGTGACGA CTGGGCCGGT CGGATTGATC TTCAGGCCGC TGTGTTGACG
GGGATCGACA TGGCCGCTGA TGCCGGCGCT TTGGCAACTT GCGCAGACCT TGTGGCGTCC
CATGGCGGCG CTCTCGGGGC CGTGACCTAT CCGGAGCCGG ACCTGCGCGC TTGGTTAACT
GCATACTTTG AGGCGGCTGC GCTGCGTGGG ATGGACCTGG ATTTCCACGT GGATGAGACA
ATGGATCCAG AGGTTAACAC CCTTAAGGAT ATTGCGGAAA TTGTGCTAGA GACAGGATTT
AAAGGGAAAA TCACCGTGGG CCATCTCTGC TCCCTGTCGG TGATGGAAGA CGCGGTGGCC
ATGGCCACTC TTGATCTGGT CGCCAAGGCC GGGCTCGATG TCGTCAGTCT GCCGATGTGC
AACCTGTATC TGCAAGACCG CCACGCCGCG CGCACGCCGC GAGGCCGGGG CATCACTTTG
GTGCACGAGA TGAAGGCGCG GGGCATCAAC GTCAGTTTCG CCTCAGACAA CACCCGAGAT
CCGTTCTATG CCTACGGTGA TATGGACATG ATCGAGGTGA TGCGGGAGGC CACGCGCATT
GGCCATCTGG ACCACTCCGA TGACGATTGG ACCCATGCGT TTCTGGGCAA TCCTGCCCGG
GCCTGTGGCG TCACGGCACC GTCGTTGATG CCCGGAGCAC CCGCCGATTT GGTGATTTGC
CGCGCCCGCG AATGGACGGA ACTTTTCGCC CGCCCGCAGG CTGACCGGAT CGTGCTGCGT
GATGGGCGCC AGATTGATCG CGCTTTGCCG GATTACGCCG AATTGGATTA CCTTATGACG
CCCTCAAGCA GCGAAGCGGT GGGGCAGAAA GCATCGCCCT CAAGCAGCGA AGCGGTAGGG
CAGCACGCAT CGCCCTCAAG CAGCGACGCG GTCGGGCAGG GAGAGATCGC CAAATGA
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| Protein sequence | MDFKTLPSDN LRLENVTIPG CLIGQSGVVR TALSIADGVI AASGGTPVDM RGAMVFPCFV
DMHTHLDKGH IWPRSPNPDG TFMGALETVR ADKSGRWDSV DLPPRMNFSL NCAYAHGTRA
IRTHLDYFGE TDEARVSWDV FAQIRDDWAG RIDLQAAVLT GIDMAADAGA LATCADLVAS
HGGALGAVTY PEPDLRAWLT AYFEAAALRG MDLDFHVDET MDPEVNTLKD IAEIVLETGF
KGKITVGHLC SLSVMEDAVA MATLDLVAKA GLDVVSLPMC NLYLQDRHAA RTPRGRGITL
VHEMKARGIN VSFASDNTRD PFYAYGDMDM IEVMREATRI GHLDHSDDDW THAFLGNPAR
ACGVTAPSLM PGAPADLVIC RAREWTELFA RPQADRIVLR DGRQIDRALP DYAELDYLMT
PSSSEAVGQK ASPSSSEAVG QHASPSSSDA VGQGEIAK
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