| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1439 |
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| Symbol | |
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| ID | 3933886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1406329 |
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| End bp | 1407711 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903789 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_509381 |
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| Protein GI | 89053930 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAC AAGCCACACG CAGACCGATG ATCCAGGCCC CCAGCCACCC CGGCCCCCAT
GACGGCTATA TGCCGGGCTT CGGCAATGAC TTTGAGACAG AGGCGCTGCC GGGTGCGCTG
CCGCAGGGGA TGAACTCGCC CCAGAAGGTA AATTACGGCC TCTACGGCGA ACAGCTCTCC
GGCACCGCCT TCACCGATGT GCGGCCTGAG CGGACGTGGT GTTACCGCAT CCGTCCCTCC
GTCAAGCACT CACACCGTTA CTCCAAGATC GACCTGCCCT ACTGGCACTC CGCGCCGACC
ATTGACCCCG ATGTGATCTC ACTAGGTCAG TACCGCTGGG ACCCTGTTCC CCATTCCGAC
ACGCCGCTGA CCTGGCTCAC CGGCATGCGC ACCATGACCA GCGCGGGGGA TGTGAACACG
CAGGTCGGCA TGGCGACCCA TGTCTATCTG GTCACGCAAA GCATGGTGGA CGATTATTTC
TACTCCGCTG ACAGTGAGAT GCTGGTTGTC CCGCAGGAGG GCCGCCTGCG CTTCTGCACC
GAGCTTGGCA TCATCGACGT GGAGCCGCAG GAGATCGCCA TTCTGCCACG CGGTCTTGTG
TACCGGGTGG AGGTGCTGGA CGGCCCCGCG CGCGGCTTTG TTTGCGAAAA CTACGGCGCG
AAGTTTGACC TTCCGGGGCG CGGCCCCATT GGCGCGAACT GCATGGCCAA CCCGCGCGAC
TTCAAGGCCC CCGTCGCGGC CTATGAGGAC CGCGAAGTGC CGTCCACAAT CACGATCAAA
TGGTGCGGCC AGTTCCACAC GTCGAAGATC GCGCAGAGCC CGCTGGATGT CGTGGCCTGG
CACGGCAATT ACGCGCCCTA CAAATACGAT CTGAAGACCT ATTGCCCCGT CGGCGCGATC
CTGTTCGACC ACCCGGACCC GTCGATCTTC ACGGTGCTGA CCGCGCCATC GGGCCAACCG
GGCGTCGCCA ACATCGACTT CGTGCTGTTC CGCGAGCGCT GGATGGTGGC CGAAAACACG
TTCCGCCCGC CGTGGTATCA CAAGAACATC ATGTCCGAAC TGATGGGCAA CATCTACGGC
CAATATGACG CCAAGCCCAA GGGGTTCGTG CCCGGCGGTA TCTCCCTGCA CAACATGATG
ATCCCCCACG GCCCCGACAA AAACGCCTTC GAGGGCGCGT CAAACGCCGA CCTTCAGCCG
CAGAAGCTCG ATAACACAAT GTCCTTCATG TTCGAGACCC GCTTCCCCCA ACACCTCACG
GCCTTTGCGG CGAATGAGGC CCCGTTGCAG GACGACTACA TCGACTGCTG GGAAACGCTG
GAGAAGAAGT TTGATCCCTC GCAGCGCCCC GATGCGGGTC ACGGGACGCC GGGCAAAAAA
TGA
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| Protein sequence | MNEQATRRPM IQAPSHPGPH DGYMPGFGND FETEALPGAL PQGMNSPQKV NYGLYGEQLS
GTAFTDVRPE RTWCYRIRPS VKHSHRYSKI DLPYWHSAPT IDPDVISLGQ YRWDPVPHSD
TPLTWLTGMR TMTSAGDVNT QVGMATHVYL VTQSMVDDYF YSADSEMLVV PQEGRLRFCT
ELGIIDVEPQ EIAILPRGLV YRVEVLDGPA RGFVCENYGA KFDLPGRGPI GANCMANPRD
FKAPVAAYED REVPSTITIK WCGQFHTSKI AQSPLDVVAW HGNYAPYKYD LKTYCPVGAI
LFDHPDPSIF TVLTAPSGQP GVANIDFVLF RERWMVAENT FRPPWYHKNI MSELMGNIYG
QYDAKPKGFV PGGISLHNMM IPHGPDKNAF EGASNADLQP QKLDNTMSFM FETRFPQHLT
AFAANEAPLQ DDYIDCWETL EKKFDPSQRP DAGHGTPGKK
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