| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1403 |
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| Symbol | |
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| ID | 3933850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1372295 |
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| End bp | 1373401 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637903753 |
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| Product | FMN-dependent alpha-hydroxy acid dehydrogenase |
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| Protein accession | YP_509345 |
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| Protein GI | 89053894 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00336342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATCCATT CAAGTGCAGA CGCGCGACGC CTGGCGAAGC GGCGTCTGCC CTGGATGGTG
TTCGATTACA TCGACGGTGC CGCCGGGGCC GAGACGGGGG CCGCGCGGGG ACGGGCGGCC
TTCGATACCT TGGAGTTGCG GCCCCGGATT TTGCGCGATG TCAGTGCGCG CGATCTTGGC
GCATCGGTCT TTGGGCAGGC AACGAAGGCC CCATTCGGCA TTAGCCCCAT GGGCATGTGC
AATCTGTCGG GCCCCGGCGC TGACATGATG CTGGCGCGGT TGGCAGCCCG CGAAGGCGTG
CCATTGGGGG TGTCGACTGT TGCGTCGACC GCCATGGAGC CGTTGATCGA GGAGGCGGAG
GGCAATGCCT GGTTCCAGCT TTACTTCACC GGCGACGGGT CCGGTACGTT CAAACTGGTA
GAGCGCGCAA AGTCCGCTGG ATATCAGACG CTTATCCTGA CGGTGGACGT TCCCGAAGTG
GGCCGCCGAC CGCGCGAATT GCGCCACGGC TTCACCATGC CGTTCAGGAT CGGCCCCAAG
CAGTTCCTTG ATTTCGCGCT GCACCCGCGG TGGTCAATTT CGTCGCTGCT GGCGGGCAAG
CCCGACATGG CGAATTTCCA GATGGAGGGG TTTGAGTTCG ACCGCACAGC CTCCCGCGCG
AAGGCGGATT TCGGCACGTT GGCCAGGCTG CGAGAGATGT GGCCCGGCAA GCTGGTGATC
AAAGGCGTGC TAGACCCGGA GGACGCGCGG CTGCTGAAAG AGGCGGGCGT GGATGCGATC
CAAGTGTCCA GCCACGGCGC GCGGCAGTTG GAAAGCGCGC CGGTCCCGAT CAGCGTCTTG
CCCGCGATCC GGGATGCGGT TGGTCCGGAA TTCCCGCTGT TTTTTGATAC CGGCCTGCGT
GGCGGAGAGG ACGTCGTGAA GGCCTATGCC CAGGGTGCAA ACTTCACCTT CCTGGGCCGC
GTGCTTCAAT TCGCCATCGC AGCGGGGGGA GAGGAGGGAT TGGCTCAGCT GTGGTCTGTG
TTGAAAGACG AGACAAGTAT CACGCTGGCG CAGATCGGCG CGACGTCGCT GGGGCACAAT
CAGTTGGCCG ACGCTATCCG GGCCTAA
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| Protein sequence | MIHSSADARR LAKRRLPWMV FDYIDGAAGA ETGAARGRAA FDTLELRPRI LRDVSARDLG
ASVFGQATKA PFGISPMGMC NLSGPGADMM LARLAAREGV PLGVSTVAST AMEPLIEEAE
GNAWFQLYFT GDGSGTFKLV ERAKSAGYQT LILTVDVPEV GRRPRELRHG FTMPFRIGPK
QFLDFALHPR WSISSLLAGK PDMANFQMEG FEFDRTASRA KADFGTLARL REMWPGKLVI
KGVLDPEDAR LLKEAGVDAI QVSSHGARQL ESAPVPISVL PAIRDAVGPE FPLFFDTGLR
GGEDVVKAYA QGANFTFLGR VLQFAIAAGG EEGLAQLWSV LKDETSITLA QIGATSLGHN
QLADAIRA
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