| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1397 |
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| Symbol | |
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| ID | 3933844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1366968 |
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| End bp | 1367990 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637903747 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_509339 |
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| Protein GI | 89053888 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00620296 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAGCAT CTCGCCCCAC CCCCACGTTG CATGACGTTG CAGAGCTTTC CGGGTTTTCG
ACGGCGACGG TGTCTCGCTG CCTGAACTTC CCGAAGCAAG TCTCGGACAA GACACGAGAC
AAGGTCATGT CCGCAATTGC GGAGCTGGGG TATTCGCCCA ACTTTGGGGC CCGCGCGATG
GCTGCGCAAC GCACAAACAC CATCGGCGCG ATTATTCCGA CGATGGAGAA CGCGATTTTC
GCCCGAGGCA TTCAGGCCTT TCAGGAAGAG TTGGACGACC ACGGCTATAA CCTGATGGTG
GCGTCCTCCT CCTACCGCGC GGATCTGGAG GAGCGTCAGA TCCGGTCTCT TGTGGCACGG
GGCGCCGATG CGCTGCTGCT GGTCGGGCAT CAACGGGACC CCGCCATCTA TCAGTTTCTG
GAGGCGCAGC GCGTCCCGAT CCTGGTGACA TGGGCCTACA CACCCGATGC GCCCCGGCCG
TCCATCGGTT TCGACAACCG CCGTTCCATG GCGAAACTCG CAGCCGAGGT TTTGCGCCTC
GGGCATCGGC GTCTGGGAAT GATTTCAGCT GAGGTCAGCA CCAACGACCG CGCCGCCGCG
CGCCTGCAGG GGATCCGCGA CGCGATGGCA GAGGCAGGCC TCCAAGCCGA CACACTGGCA
GTGATTGAGG CGCCCTATGG CATCGACACG GGCGCGGAGG CGTTTGCGCA ATTGATGCAA
TCCAGCGAAC CGCCCACAGC GGTGCTCTGC GGAAACGACG TCTTGGCCGT GGGGGCCCTG
GGCCGCGCCC GGGACCTGGG CCTGGACGTG CCACGCGACG TGTCGATCCT GGGCTTCGAC
GATATCGAGT TGGCCCAGGT GGCCTTCCCT AAACTGTCAA CCGTCCACGT CCCGCACCGG
GACATGGGCC GCGCCGCCGC CCGCGCGCTG ATCCGGACCC TGCAAGACGG ATCTCCGATC
ACGGGCCAGG AATTGCCCGC TGACGTTTAT CTGCGCGACA GCCTGGGTCC TGCACCAAAT
TAA
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| Protein sequence | MTASRPTPTL HDVAELSGFS TATVSRCLNF PKQVSDKTRD KVMSAIAELG YSPNFGARAM
AAQRTNTIGA IIPTMENAIF ARGIQAFQEE LDDHGYNLMV ASSSYRADLE ERQIRSLVAR
GADALLLVGH QRDPAIYQFL EAQRVPILVT WAYTPDAPRP SIGFDNRRSM AKLAAEVLRL
GHRRLGMISA EVSTNDRAAA RLQGIRDAMA EAGLQADTLA VIEAPYGIDT GAEAFAQLMQ
SSEPPTAVLC GNDVLAVGAL GRARDLGLDV PRDVSILGFD DIELAQVAFP KLSTVHVPHR
DMGRAAARAL IRTLQDGSPI TGQELPADVY LRDSLGPAPN
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