Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1377 |
Symbol | |
ID | 3933824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1345777 |
End bp | 1347066 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637903727 |
Product | aminotransferase |
Protein accession | YP_509319 |
Protein GI | 89053868 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.427783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.27217 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCA CGCAGCAACA ACTTTTGTCG GATCGCGCTC GGCTTCTTGG GCCAAACGTT TCGACTTTCT ATAATGACCC TGTGCATATC GTGAAGGGCG ATGGCGTTTG GCTTTGGGAA GCGGAGGGGC GCAAGTATCT GGATTGTTAC AACAATGTCC CGCATGTGGG CCATTGCAAT CCGCGCGTGG TTGACGCGAT CTGCCAGCAG GCCAGTACGC TCAATACCCA CACACGATAC CTCCACGACG GCATTCTAGA CTATGTTGAG GCGTTGACGG CAACCATGGC CCCATCCCTG AACACCGCGA TCCTGACCTG CACCGGGTCC GAGGCCAACG ACATCGCGCT GCGCACGGCA GAGGCTGTGA CCGGCAAACG CGGGATCATC GCAACGGACG CCACATATCA TGGCAATACA GCGCTCGTGA GCCAGTTGAG CCGCTCCAAC GTGCCGGCGG TGGGCTTTGG TCTTGGCCAA TATGTCCGCT TTGTCGACGC CCCCGACAGC TACCGCACGC CGGACCATGA TGGTCAGATC TTTGCCGCCA GCGTGGCCCA TCAAATCGCC GCGTGGGAAG AGGATGGTAC GGGTTTTGCC GCTCTCATCA TATGCCCCTA CATGCTGAAC GAAGGCTTCC CCGATCACCC CGATGGATGG CTGAAACCCA CGGCTGACGT GGTGCGCAAA GCGGGTGGGT TGCTGATCTG CGATGAGGTG CAATCTGGCT TTGGCCGCAC GGGCACGCAT ATGTGGGCCC ATGAGAAGAT GGGCGTCGTG CCGGATATCA TGACGCTCGG TAAGCCGATG GCCAACGGTC ACCCTGTGGG TGGCGTGGTG GCCAACAGCG ACCTGATTGC CACGTTCCGA GAGGGGTATC GGTATTTCAA CACCTTTGGC GGAAATCCCG TATCCTGCGC GGCGGCGATG GCGGTGCTGG AGGAGTTACA AGAGGCCGAC TTGATCGCCA ATGCCAAATG TGTCGGCGAT CACGCGCGCC GAAGGTTGCT GACGTTGAGA GAAAAACACG ACGTGATCGG CGACGTGCGC GGCTCGGGCC TGATCTTCGG GGCTGAACTG GTGCTGGACC GGACCAGCAA AGCCCCTGCG AGCGGTTACA CCGACCAGAT CATCAACGAG ATGCGGCACC GCGGGATCCT GCATTCCAAA CTAGGCCGTC ACAAGAACAC CCTGAAGATC CGACCGCCAA TGCCATTTTC TGTGGAACAT GTGGATCTGC TGCTGGATAC ACTGGATGAG GTGTTGAGCC ACGTTCCGCT GTCCCCATGA
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Protein sequence | MARTQQQLLS DRARLLGPNV STFYNDPVHI VKGDGVWLWE AEGRKYLDCY NNVPHVGHCN PRVVDAICQQ ASTLNTHTRY LHDGILDYVE ALTATMAPSL NTAILTCTGS EANDIALRTA EAVTGKRGII ATDATYHGNT ALVSQLSRSN VPAVGFGLGQ YVRFVDAPDS YRTPDHDGQI FAASVAHQIA AWEEDGTGFA ALIICPYMLN EGFPDHPDGW LKPTADVVRK AGGLLICDEV QSGFGRTGTH MWAHEKMGVV PDIMTLGKPM ANGHPVGGVV ANSDLIATFR EGYRYFNTFG GNPVSCAAAM AVLEELQEAD LIANAKCVGD HARRRLLTLR EKHDVIGDVR GSGLIFGAEL VLDRTSKAPA SGYTDQIINE MRHRGILHSK LGRHKNTLKI RPPMPFSVEH VDLLLDTLDE VLSHVPLSP
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