| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1368 |
|---|
| Symbol | |
|---|
| ID | 3933815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1335546 |
|---|
| End bp | 1336808 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637903718 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_509310 |
|---|
| Protein GI | 89053859 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3487] Uncharacterized iron-regulated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGAA CGATCCTTAC GACAACAGCT TTGGCAAGCT TCCTGGCCGG ACCGGCCCTG
GCCCAGGATG CCGCTGACGT CCTGAACACC TACGCCGACA TTGCGGCGGC GGGCTACGAG
GATAGCCTGA TCACGGCCCA GGCCCTTGAG CGCGCCGTAG ATGCGCTGAT TGCCGAGCCG
TCTGCGCAAA CGCTGACCGC TGCCCGCACG GCTTGGCTCC AGGCCCGCGT GCCCTATCAA
CAAACGGAGG TGTTCCGCTT CGGCAATGCC ATCGTCGATG ATTGGGAAGG TCGCGTGAAT
GCCTGGCCCT TGGATGAGGG TCTGATCGAC TATGTGGACG GTGCCTATGG CGGTCCCACC
GATGAGAACA CGCTCGCCGC GGTGAACGTG ATCGCCAATC CAACCTTCAC GCTCTCGGGC
TCCGAGGTTG ATGCGTCGTC GATCACGCCC GCACTCCTCG AAGACACGCT GCACGAAGCT
GATGGGGTGG AGGCTAATGT CGCCACCGGC TATCACGCCG TGGAATTCCT GCTCTGGGGC
CAGGACCTGA ACGGCCACGG CGATGGCGCA GGGAACCGGC CCTACACCGA TTATGCCGCT
GGCGATGACT GTACGGGCGG CAATTGTGAT CGCCGGGCCG AATACCTGGC GGCGGCGACC
GAGCTTTTGG TGTCTGACCT CGAATGGATG GCCGCGCAGT GGACCGCTGA TGGGGACGCC
CGAGCGGCCC TGATGGAGAA TGAGCAGGCG GGCCTATCTG CGATGCTGAC CGGCATGGGC
AGCCTCAGCT ATGGCGAGAC GGCAGGGGAG CGGATGCGCC TTGGCTTGAT GTTGAATGAC
CCGGAGGAGG AGCATTCCTG CTTCGCCGAC AACACCCACA ACGACCATTT CTTCAACGGT
GTGGGCGTGC GCAATGTCTA TCTGGGCAGC TATTCCCGGA TCGATGGCAC GCTTGTTTCT
GGCCCGTCCC TCTCGGATCT CGTGATGGAT GTAGATGCTG ATCTGGATGC AGAGATGCGG
TCGCGTCTGG CCGAGGCCGT TCTGGCCCTG GGTGAGATCA AGACCGCAGC GGAGGCGGGC
TTTGCCTATG ACGAGATGCT TGAGCGCGGT AATGAAGGTG GTGAGCTGCT CATCATGGGT
GGCGTCAACG GCCTGATCGA GCAGACCCGT TCGATCGAGC GGGTTGTGAC GGCGCTTGGC
CTGGATGGAA TCGAATTTGA AGGCTCCGAC AGCCTCGACA ACCCCTCCGC CGTTTTCCAG
TGA
|
|---|
| Protein sequence | MTRTILTTTA LASFLAGPAL AQDAADVLNT YADIAAAGYE DSLITAQALE RAVDALIAEP
SAQTLTAART AWLQARVPYQ QTEVFRFGNA IVDDWEGRVN AWPLDEGLID YVDGAYGGPT
DENTLAAVNV IANPTFTLSG SEVDASSITP ALLEDTLHEA DGVEANVATG YHAVEFLLWG
QDLNGHGDGA GNRPYTDYAA GDDCTGGNCD RRAEYLAAAT ELLVSDLEWM AAQWTADGDA
RAALMENEQA GLSAMLTGMG SLSYGETAGE RMRLGLMLND PEEEHSCFAD NTHNDHFFNG
VGVRNVYLGS YSRIDGTLVS GPSLSDLVMD VDADLDAEMR SRLAEAVLAL GEIKTAAEAG
FAYDEMLERG NEGGELLIMG GVNGLIEQTR SIERVVTALG LDGIEFEGSD SLDNPSAVFQ
|
|---|
| |