| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1349 |
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| Symbol | |
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| ID | 3933796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1313539 |
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| End bp | 1314684 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903699 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_509291 |
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| Protein GI | 89053840 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.970242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGATCACG ACACTCAAGA GCTGAAGTCG GCAGAGCGCC GCAATTTCCT GAAGCTGACC
GGCGCAGGTG CATTCACCGC CGCCATGGTC GCCGGTGGCG CGGGCATGCT GTGGTCGACT
GAGGCCGCAG CCCAGACCCA ACAGGAAGAG GCCGCGCGCG AAGCCGCAGC CGAGCACATT
ATGACGCTGG CCACGGCCTA TGTTCTGGGT GCCTCGCGCA GCTATCCGAT CATGCAACTG
GACCTGAAAG AGAATATCCA GAACATGACC AACGGCAAAG TCTATGTGCG TCTCGCGCCG
GGCGGTCAGT TGGGGGCAGG GGGCGCTTTG GCTCAGGCCG TGCAATCCGG CACGATCCAA
TGCGCGCAGC ACTCGCTGGC CAACTTCGCA CCGTTTGCCT CCGCCGTTGA TCTGATCAAC
CTGCCGTATT TCTGCGGCTC CAACCAGCGC TTCACCAACC TGACCTCGTC GGATGCTTGG
AAAGAAGAAG TGGACCCGCG TATCGGAGAG TCTGGTTTCA AAGCCCTGAT GTATATCGTC
ATCGACCCCC GCGTCGTGGC CGTGCGCCAG GGCGGCGACG CGATCATCAC GCCCGCCGAC
ATGGAAGGCG TCAAGTTCCG CGTTCCCGGA TCTGCAATGT TGCAGCAATA CTACCGTATG
GTCGGCGCCA ACCCGACGCC CGTGGCCTGG GGTGAGACAC CGTCCGCGAT CCGCCAGGGT
GTGGCCGACG CACTCGACCC GTCCGTGGGC GCATTGCACG TCTTCGGCTT TGGTGAAATC
CTCAGCCATG TGACCTTCAC GCAGGCCGTG CCCGACAGCC AAGTCTACTC GGTCAATCTG
GAATGGTTCA ACTCGCTGCC TGCCGACGTG CAGGAAGGCA TTGAGTTTGC AGGCGAAGTC
ACCCAGCAGC AGAACCTGGC CAAAGTGCCC TCGGCGCGGT CCTACGCGAT GTCCCAATTG
TCGGCAAATG GGGTGGAGTT CCACTCCCTG TCGGACGATC AACTGGCCGA GTGGCAGTCC
GTGGGCGGCT ATCAATTGCC CGATTGGGAC GAGTTCAAAG TCGATCTGGC CGGCTCCATG
GAGACCTTCG CCCGTCTTGA GGAAGCCGCA GGCACCGCCA GCCGCTACTA CGTCCACGAC
GCCTAA
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| Protein sequence | MDHDTQELKS AERRNFLKLT GAGAFTAAMV AGGAGMLWST EAAAQTQQEE AAREAAAEHI
MTLATAYVLG ASRSYPIMQL DLKENIQNMT NGKVYVRLAP GGQLGAGGAL AQAVQSGTIQ
CAQHSLANFA PFASAVDLIN LPYFCGSNQR FTNLTSSDAW KEEVDPRIGE SGFKALMYIV
IDPRVVAVRQ GGDAIITPAD MEGVKFRVPG SAMLQQYYRM VGANPTPVAW GETPSAIRQG
VADALDPSVG ALHVFGFGEI LSHVTFTQAV PDSQVYSVNL EWFNSLPADV QEGIEFAGEV
TQQQNLAKVP SARSYAMSQL SANGVEFHSL SDDQLAEWQS VGGYQLPDWD EFKVDLAGSM
ETFARLEEAA GTASRYYVHD A
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