| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1282 |
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| Symbol | |
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| ID | 3933729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1242520 |
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| End bp | 1243578 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637903632 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_509224 |
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| Protein GI | 89053773 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000725073 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.939834 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGCGC TTGCTCAACT GACGGAGCGA ACCGCGCGAG ATCGTGTTAC GATTTCGCAC
ATGGCGGATG CTCTCGGCGT GACCAAGTCC ACTGTGTCGC GCGCGATGAA CGGCTACCCT
GACATCTCCG AAGCGACACA GTTGCGGGTC AAGCGCATGG CCGAAAAAAT GGGCTATCAG
CCCCTTAGTC ATGCGCAGGC GATCAAGACG GGGCGGGCGC GTTCCCTCGG CCTCGTGCTT
CAGTTTTCAG ACCACGACGC CCAACGTCCG TTTCTGGCGG AGTTTCTTGC CGGGTTGTCG
GCCGGAGCAC ATACCGATGG CTGGACGTTA ACGGTTGCAG CGGCCGACGG CCACGATGAG
TTGATCGAAA CGTTTCGTGC CATATTGCGC GACGGAAAGG CCGATGGGTT TATTCTGCCA
CGGGCTATGT CGACTGATCC CCGGGTGTAT CTGCTGCGAG ATGCGGGCGT TCCATTCGTT
CTGTTTGGAC GGCAAGACAA AGAAGAGGGC TGCGCCTGGT TCGACGTTCT GGGCGAAGAG
GCGATGTGCG ATGCTGTGCT GCATTTAGCA ACGCTGGGCC ATCGCCGCAT CGGGTTTATC
AATGGTGGTC TGCAATATGC CTATGCCCGT CTGCGGGCTG CTGGTTTCGC GGATGGGATG
CAGATTGCCG GGCTTGAGAT GGACGACAGC CTCATCGCTG ATGATGCGAT GACGATGGAG
AGCGGAGCAG TGGCGGCGGC GCGAATTCTC GACACGACCA ACCCGCCGAC TGCGTTGGTC
TGCGCCGTTG ATTTCGCCGC TCTTGGCGCA TACCGCGCTG CCGCAGACAG GGGGATAATC
ATTGGCCGGG ATCTGTCGAT CATTGGCTAT GACGGCATCC CTGAGGGGGC CTTTGCCCAC
CCCCCGCTGA CAACATTCGC GGTGGATAAC CGTGCTGCTG GTTTCGCGCT GGCAACGTTA
CTGATCCAGC GCATCAAGGG CGAACCCCTC GAAACACTGC GGAGACTAGT TCCCGCCACC
TTTGTGGAAC GCGCGTCCAC GGGACCAGCC AAGGCATGA
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| Protein sequence | MAALAQLTER TARDRVTISH MADALGVTKS TVSRAMNGYP DISEATQLRV KRMAEKMGYQ
PLSHAQAIKT GRARSLGLVL QFSDHDAQRP FLAEFLAGLS AGAHTDGWTL TVAAADGHDE
LIETFRAILR DGKADGFILP RAMSTDPRVY LLRDAGVPFV LFGRQDKEEG CAWFDVLGEE
AMCDAVLHLA TLGHRRIGFI NGGLQYAYAR LRAAGFADGM QIAGLEMDDS LIADDAMTME
SGAVAAARIL DTTNPPTALV CAVDFAALGA YRAAADRGII IGRDLSIIGY DGIPEGAFAH
PPLTTFAVDN RAAGFALATL LIQRIKGEPL ETLRRLVPAT FVERASTGPA KA
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