| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1271 |
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| Symbol | |
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| ID | 3933717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1231668 |
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| End bp | 1232681 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637903620 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_509213 |
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| Protein GI | 89053762 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.494716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.616088 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACCA GACTTCCCCC CTATGCCACA TTCGGCCAGC GCCTTTGGTT CTACGGTTTC
CGGGTCATTT GCGGGCTGAT CTTCTTCTTC CTGATCGCGC CGATCCTCAC CATCATCCCG
CTCAGCTTCA ACGCCGAGGA TTTCTTTACT TTCACGCCCG GCATGCTGGC GCTCGATCCC
GAGGCCTACA GCTTGCGCCA CTACCGCGCG TTCTTCGGGG AGGATGGCTA TCCCTGGATC
GGCCTGCTGA TCGGTCTGGG CCTTGGGGTG GCGATCACCG TGGTTTTGAA GGTGTGGAAG
GGCAGCACCA ACTACTTTCC CATCTTCATC TTCGCGATCA TTGGCCTGAT TGTCGGCAAA
CTTTCGGGCC TTGAGGGGGA GGAGTGGATG ACGCCGATGC GCAACTCCCT CCGGATCGCC
CCAGTCGCGA CGCTTCTGTC GGTGGGGTTC GGGACGCTGG CGGCCATCGG CCTGTCGCAA
AGTCATGTGC CGTTCAAGGG CGCGATCATG GCGATCCTGA TCTCGCCCAT GATTGTGCCG
CTGATCATCT CTGCGGCGGG GATGTATTTC TTCTATTCGC GCATTGGCCT ACAGGGCACC
TTCATGGGCG TGGTTCTAGC CCATGCGGCA TTGGGCATTC CCTTCGTAAT CATCACCGTC
ACGGCCACGC TGGTAGGCTT TGACCGATCA TTGACGCGGG CGGCGGCGAA CCTTGGGGCG
AACCCGGTGA CGACGTTCTT CCGGATCCAG ATGCCGCTGA TCCTGCCGGG CGTGATCTCG
GGCGGGTTGT TTGCGTTCAT CACGTCCTTT GACGAGGTGG TCGTGGTCAT CTTCGTGGGC
TCCGCCGGGC AGCAAACATT GCCGTGGCAG ATGTTCACCG GCCTGCGGGA ACAGATCAGC
CCGACAATCC TGGCGGCGGC GACCGTGCTC GTGGCCATCT CGGTCATCCT GCTGACGGTC
GTGGAACTCC TGCGCCAACG GTCAGAACGC CTGCGGGGCA TTGCGCCGCA TTGA
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| Protein sequence | MDTRLPPYAT FGQRLWFYGF RVICGLIFFF LIAPILTIIP LSFNAEDFFT FTPGMLALDP
EAYSLRHYRA FFGEDGYPWI GLLIGLGLGV AITVVLKVWK GSTNYFPIFI FAIIGLIVGK
LSGLEGEEWM TPMRNSLRIA PVATLLSVGF GTLAAIGLSQ SHVPFKGAIM AILISPMIVP
LIISAAGMYF FYSRIGLQGT FMGVVLAHAA LGIPFVIITV TATLVGFDRS LTRAAANLGA
NPVTTFFRIQ MPLILPGVIS GGLFAFITSF DEVVVVIFVG SAGQQTLPWQ MFTGLREQIS
PTILAAATVL VAISVILLTV VELLRQRSER LRGIAPH
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