| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1266 |
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| Symbol | |
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| ID | 3933712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1226586 |
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| End bp | 1227683 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637903615 |
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| Product | ABC transporter related |
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| Protein accession | YP_509208 |
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| Protein GI | 89053757 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.358849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.95628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCTCAG ACGGATCGCA AGCGTTCGTA TCGTTCGACC GCGTTCAAAA AAGCTATGAC
GGCGAGATCC TCGTTGTCAA AGATCTGAAC CTTCACATCG GCCGGGGCGA GTTCCTGACA
ATGCTTGGGC CTTCGGGCTC TGGCAAAACC ACGTGCCTGA TGATGCTGGC GGGGTTCGAG
ACCGCCACCC ATGGTGAAAT CACCCTCGAC GGCAAGCCGA TCAACAACAT CCCGCCCCAC
AAGCGCGGCA TCGGCATGGT GTTTCAGAAC TATGCACTGT TCCCCCATAT GACAGTTGGG
GAAAACCTGT CCTTCCCGCT GGAAGTGCGC GGCATGGCCA AGTCCGAGCG GGAGGGCAAG
ATCAAGCGCG CGCTGGACAT GGTGCAGATG GGCGATTTCA TCAACCGTCG CCCGGCGCAG
CTATCGGGGG GGCAGCAACA GCGGATCGCC CTGAGCCGCG CTTTGGTGTT CGAGCCGGAG
CTGGTTCTGA TGGACGAGCC CTTGGGCGCG CTCGACAAGC AATTGCGCGA GACGTTGCAG
TTCGAGATCA CGAACCTCGC TCATGAGCTG GGGATTACGA CCGTCTACGT GACCCACGAC
CAGACTGAGG CGCTGACCAT GTCGGACCGT GTTGCCGTCT TCGACGATGG CCGCATTCAG
CAACTGGCCC CGCCCGACCA GCTATATGAA GAGCCGCAGA ACAGTTTTGT CGCGCAGTTC
ATTGGCGAGA ATAATACGCT TCAGGGCACC GTCTCCAAGA TGGCGGATGA CATGTGTGAA
GTGACGCTGG AAGACGGATC CGTCATCGAT GCGCTGCCGG TAAACGTCAG TGCCGTGGGT
GAGAAGACGC AAGTGTCCAT TCGCCCCGAA CGGGTAGAGA TGGACCCAAG CCGGTTGACC
CCCGGGGCCC ATACCCTGAA GGCCGAGGTC AAGGAATTCG TCTATATGGG TGACATCTAT
CGCACGCGTC TGGCCGTGGC GGGCCGGGAC GATTTCATCA TCAAAACACG AAATGCCCCC
GATCAGCGCA GGCTGAAACC GGGGGAGAGT ATCGAGATCG GCTGGCGTCC GCAGGATTGC
CGCGCGCTTG ATGCGTAA
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| Protein sequence | MTSDGSQAFV SFDRVQKSYD GEILVVKDLN LHIGRGEFLT MLGPSGSGKT TCLMMLAGFE
TATHGEITLD GKPINNIPPH KRGIGMVFQN YALFPHMTVG ENLSFPLEVR GMAKSEREGK
IKRALDMVQM GDFINRRPAQ LSGGQQQRIA LSRALVFEPE LVLMDEPLGA LDKQLRETLQ
FEITNLAHEL GITTVYVTHD QTEALTMSDR VAVFDDGRIQ QLAPPDQLYE EPQNSFVAQF
IGENNTLQGT VSKMADDMCE VTLEDGSVID ALPVNVSAVG EKTQVSIRPE RVEMDPSRLT
PGAHTLKAEV KEFVYMGDIY RTRLAVAGRD DFIIKTRNAP DQRRLKPGES IEIGWRPQDC
RALDA
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