| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1251 |
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| Symbol | |
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| ID | 3933696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1206774 |
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| End bp | 1207421 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637903599 |
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| Product | ABC transporter permease |
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| Protein accession | YP_509193 |
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| Protein GI | 89053742 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3932] Uncharacterized ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.531282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.725571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCAG GCCGGCGTTA TCTGTCCATG ACGACGTCTT CCAACAGCGG CACATCCGAC
GCATCGCCCC CGCCAGAGCC GGTTCTGTCG TCCATCGCGG ATGACATGGT CCGGGCCGCC
GAGAAGGATG ATGGCCGGGT GGAGGCGATG GTTGAGCAGG CCGGGGCGGA CGGATTGCTA
CCGATCATGA CCTGCCTCGG TCTGATCCTT GTCTCGCCGC TTTCGGGAAT TCCGCTGTTC
TCGACAAGTG TCGGCATGAT GATCGCGCTC TGCGCCTCCC AGGCCGCGAT GGGTCGTGAC
AAGCTCTGGC TGCCGGGATT CTTGCGGCGA CGTCAGGTGG ATCCGGACCG GGTCGTCTCG
GCCATGGGCT ATGTCCGCAG GGCCGCGCGC TGGTTGGAGG CGCGGGCCGC CCCGCGCCTG
GAATGGCTCA GCGTCCCACC GGCCCGAACT GTTTTCCTCG GCCTTGCAGC GCTTTACGGG
CTGTCGATGC CCCTGATGGA AGTCGTGCCC TTCACATCCA CGCTCTTTGG TGCGGCGGTG
GTGATGGTCG GCCTGGGCCT CATCCTGCGC GATGGGATCC TCCTGCTGTT GTCGACACTG
CCCCCGGTGA TCGCGGCACT CGTGCTGACC ACGATTTTCG CCGGCTGA
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| Protein sequence | MPPGRRYLSM TTSSNSGTSD ASPPPEPVLS SIADDMVRAA EKDDGRVEAM VEQAGADGLL
PIMTCLGLIL VSPLSGIPLF STSVGMMIAL CASQAAMGRD KLWLPGFLRR RQVDPDRVVS
AMGYVRRAAR WLEARAAPRL EWLSVPPART VFLGLAALYG LSMPLMEVVP FTSTLFGAAV
VMVGLGLILR DGILLLLSTL PPVIAALVLT TIFAG
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