| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1235 |
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| Symbol | |
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| ID | 3933680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1191176 |
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| End bp | 1191712 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637903583 |
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| Product | Allergen V5/Tpx-1 related |
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| Protein accession | YP_509177 |
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| Protein GI | 89053726 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.637281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACATC GAGCAAACAA AAAGGGATCA CCCCCAATGA AGATCCGTAT CGCAAGTGGC
CTTATTGCCC TCGCCGTGGC CCTTACGGCC TGCACACCGA CAACCGGCGC CAGCGGCGTC
TCAGGCGGGG CGGGCGATGT CCAGCGGCTG AGCTTTGGTC AAAGCGTCGA TCTGGCCTCC
GTCGGTGCGC GGCTCGCGAC CCTGCGCGCG CGTCAGGGAT TGTCTCAGCC CCTGTCCCAT
TCCGCGGCGT TGCAGGCTGC GGCCCAGGCC CATGCCGATG ATATGGCGCG CACTGGCAAT
TTCTCGCACC GGGGGGCGAA TGGGTCCAAC TTGGCATCGC GTGTGCGCGC GGCGGGCTAC
AGCGCCTGCT ACGCCAACGA AAACATCGCC TTCGGCCAGG CCAACACGGC GCAGGTGTTC
CAGGATTGGA TGGCCTCCAG CGGGCATCGC CGCAACATAT TGGCCGCACG CGCGACCCAG
TTTGGCTATG CGCAGCGAAA CGGCTATGCG GTCTTGGTCC TGGGGCGCAG CTGCTGA
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| Protein sequence | MGHRANKKGS PPMKIRIASG LIALAVALTA CTPTTGASGV SGGAGDVQRL SFGQSVDLAS
VGARLATLRA RQGLSQPLSH SAALQAAAQA HADDMARTGN FSHRGANGSN LASRVRAAGY
SACYANENIA FGQANTAQVF QDWMASSGHR RNILAARATQ FGYAQRNGYA VLVLGRSC
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