| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1221 |
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| Symbol | gatA |
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| ID | 3933666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1179939 |
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| End bp | 1181423 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637903569 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_509163 |
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| Protein GI | 89053712 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATT TGAATGCCTT GACCATTGCC GACGCCCGGG ACGCCCTGCG CAAGGGAGAG
GTCACATCCG TGGACCTGAC CCAGGCCTGC CTGTCCGCGA TTGACCAAGC CGATGCGCTT
GGCACCTTCG TCCACAAGAC GCCGGATCTG GCGCTGGAAC GTGCGAAGGC CGCGGACGCC
CGGATCGCAG AGGGTGACGC GCCCGACATG TGCGGCATTC CCGTGGGCAT CAAGGATCTG
TTTTGCACCG AAGGTGTCCC CAGCCAGGCG GCATCCAGAA TCCTGGACGG CTTCAAACCG
GAATACGAAT CCACCGTGTC TGGCAAGTTG CGGGACGCGG GCGCGGTGAT GTTGGGCAAG
CTGAACATGG ACGAATTCGC CATGGGCTCC TCCAACGAAA CGTCCGTTTA CGGCAATGCC
GTGAACCCAT GGCGCGCGGG CAATTCCGAC GCGGCCCTGA CACCGGGGGG ATCGTCAGGC
GGGAGTGCGT CAGCTGTGGC GGGCGATCTG TGTTTGGCGG CAACGGGTAC GGATACGGGC
GGCTCCATCC GGCAACCGGC GGCGTTCACC GGCATCGTTG GCCTGAAGCC CACCTACGGG
CGGTGCTCGC GCTGGGGGAT CGTGGCGTTT GCGTCATCCC TCGATCAGGC CGGGCCGATG
ACCAAAACCG TGCGCGACGC GGCGATCATG GGTCGTGCGA TGATGGGCTA TGACGCGAAG
GACAGCACGT CTGCCAATAT CGACGTGCCG GATTTTGAGG CGATGCTGAC CGGCGACATC
CGCGGCAAAA TCATTGGTAT TCCAAAGGAA TATCGCATGG ACGGCATGCC AGACGAGATT
GAGACACTCT GGGCCGACGG CACCGCAATG CTGAAGGACG CGGGCGCTGT GATCCGCGAT
ATCTCCCTGC CGCACACGAA ATACGCCCTG CCCGCCTATT ATGTGATCGC ACCGGCGGAG
GCGTCATCGA ACCTCGCGCG CTATGATGGC GTGCGCTTCG GCTACCGCGC CGATATGGCG
CCGGGTGACG GCATCACCGA GATGTATGAA AAGACCCGCG CGGAAGGCTT CGGGCCCGAG
GTGCAGCGCC GCGTGATGAT CGGCACCTAT GTGCTCTCCG CCGGGTTCTA TGACGCCTAT
TACAACCGGG CGCGGCGCGT GCGGGCGTTG ATCAAGCGTG ATTTCGATGA GGTGTTCGCC
GCCGGTGTCG ATGCAATCCT GACCCCCGCC ACCCCCTCTG CCGCGTTCGA GTTGGGCAAG
GAGGTCAGCG ACCCGGTCGA GATGTATCTG AACGACGTCT TCACCGTGAC GGTCAACCTC
GCGGGTCTTC CGGGCGTCGC GGTGCCGACG GGCGTGGACC GCAACGGTCT GCCCCTTGGG
TTGCAACTGA TCGGCAAGCC GTGGGAGGAG GGCGAGTTGC TGAACACCGC CTATGCGCTG
GAGGCGGCCG CCGGTTTTGT GGCAAAGCCC GCGCGTTGGT GGTAG
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| Protein sequence | MSDLNALTIA DARDALRKGE VTSVDLTQAC LSAIDQADAL GTFVHKTPDL ALERAKAADA
RIAEGDAPDM CGIPVGIKDL FCTEGVPSQA ASRILDGFKP EYESTVSGKL RDAGAVMLGK
LNMDEFAMGS SNETSVYGNA VNPWRAGNSD AALTPGGSSG GSASAVAGDL CLAATGTDTG
GSIRQPAAFT GIVGLKPTYG RCSRWGIVAF ASSLDQAGPM TKTVRDAAIM GRAMMGYDAK
DSTSANIDVP DFEAMLTGDI RGKIIGIPKE YRMDGMPDEI ETLWADGTAM LKDAGAVIRD
ISLPHTKYAL PAYYVIAPAE ASSNLARYDG VRFGYRADMA PGDGITEMYE KTRAEGFGPE
VQRRVMIGTY VLSAGFYDAY YNRARRVRAL IKRDFDEVFA AGVDAILTPA TPSAAFELGK
EVSDPVEMYL NDVFTVTVNL AGLPGVAVPT GVDRNGLPLG LQLIGKPWEE GELLNTAYAL
EAAAGFVAKP ARWW
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