| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1200 |
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| Symbol | |
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| ID | 3933644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1160864 |
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| End bp | 1162798 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637903548 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_509142 |
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| Protein GI | 89053691 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.994083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCCC GGCAAGATTG GACGCCCATG ACGACTTTCG CAGACCTCGA TCTCAATCCC
AAAGTTCAAA AAGCCATCGT GGAGGCGGGA TATGAAAGCC CAACCCCCAT CCAGGCCGGC
GCAATTCCGC CCGCCCTCGC GGGCCGCGAC GTGTTGGGCA TCGCCCAGAC AGGCACCGGC
AAGACCGCGT CGTTCACCCT GCCGATGATC ACCATGCTGG CCCGTGGCCG CGCCCGCGCG
CGGATGCCGC GGTCCCTCGT CCTGTGCCCC ACGCGAGAAC TCGCCGCACA AGTGGCAGAG
AACTTTGATA TTTACGCCAA GCATGTGAAG TTGACCAAGG CCCTATTGAT CGGTGGCGTG
TCCTTTAAGG AGCAGGAGCA GGCCATCGAC AAAGGCGTCG ATGTCCTCAT CGCCACACCG
GGCCGCCTGC TGGACCATTT CGAACGCGGC AAGCTGATCC TGAACGACGT GAAAGTCATG
GTCGTGGACG AGGCCGACCG GATGCTGGAC ATGGGCTTTA TCCCGGATAT CGAGCGGATC
TTCGGCCTGG TTCCCTTCAC CCGCCAGACG CTGTTCTTCT CGGCCACCAT GGCCCCGGAG
ATCGAGCGCA TCACCAACAC ATTCCTGTCC AACCCCGAGA AGATCGAAGT GGAGCGTCAA
TCCACGACCT CCGCCACGAT CGAACAGCGG TTGATCGAAT TCAAAGCGCC CCGCCGCGAT
GCGCAGGCCA AGATGAAGCG CGACATGCTG CGCGCCGCGA TCACGGCGGA GGGCGATGCC
TTCCGCAACG CCATCATCTT CTGCAACCGC AAGGTGGATG TGGATATCGT TGCCAAGTCG
TTGAAAAAGC ATAACTTGAA TGCTGAGCCG ATCCATGGCG ATCTGGACCA ATCGCACCGG
ATGCGCACGC TTGCAGGCTT CCGCGACGGG TCGATCACCT TGCTTGTGGC CTCTGACGTT
GCGGCCCGCG GCCTCGACAT TCCCAACGTG AGCCATGTAA TCAACTACGA TGTGCCCTCC
CACGCAGAGG ACTACGTGCA CCGCATTGGC CGCACGGGTC GCGCGGGCAA AACAGGTGTC
GCGATCACGC TGTGCGTCCC CTCCGATGAG AAGTATCTGG GCGCGATTGA GGGGCTGATC
AAACAACCGA TCCCGCGCGC GGAGGCGCCG ATGGATGCCG GTACGCCGAA GGCGGAGACC
GAGGACAAAC CGCGCAGATC GCGCCGTGGG GGTCGCCGGT CCGAAGAGCC CAAGGCCGAG
GAAAAGCAGG CCGACGCAGC GCCGGAGCCT GCGCGGGAAG AGGCGAAGCC AGAACCACAG
CGGCAGCAAC AGCCACAGCC CCGTCGCGAA CGCGGCGACC GCGGTGAGCG GAATGACCGC
GGAGGTCGGG GCCGGGGACG TGACCGGGGC GACCGTGGCC CCCGCATCGT GGGAATGGGG
GACTTCACCC CTGACTTCAT CGGCCTGAGC TTTGACGAAC GTCGCGGCGG CCCGGCCCGG
GAAATGAACC TGGACGAGGA TGAGCCCGCG ACAGAAATCC CTGCAGAAAC AACCGTCGAG
GCCCCTGCAG AGACCCCAAC GCCGACAGAA GAGAAGCCGA AACGTCGCCG CACGCGCAAG
AAGCCCGAGC CTGCGACAGA GGACGCGCCA GCTGAGGCGG CGACCGAAGC GCCCGCTGGA
GACGACGCCC CGACGGAGGC AGCCGCAGAC GCACCCGTTC CGGAGGAAAA GCCCAAGCGT
CGCCGGGCAC CCCGCAAGAA AGCAGACGCG ACGCCAGCTG AGGCCGAGCC GGACGCCCCG
GCACCGGACG GCGACGCGGA AGAAAAGCCC AAGCGCCGAC GCACGCGGAA AAAGAAGGTC
GAAGAAGACG CGCCCGAGGC CGCCGATGCG GCTGATCCTG CCGAGGCTAC GGCAGACGCG
CCCTCCGCCG ACTAA
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| Protein sequence | MSPRQDWTPM TTFADLDLNP KVQKAIVEAG YESPTPIQAG AIPPALAGRD VLGIAQTGTG
KTASFTLPMI TMLARGRARA RMPRSLVLCP TRELAAQVAE NFDIYAKHVK LTKALLIGGV
SFKEQEQAID KGVDVLIATP GRLLDHFERG KLILNDVKVM VVDEADRMLD MGFIPDIERI
FGLVPFTRQT LFFSATMAPE IERITNTFLS NPEKIEVERQ STTSATIEQR LIEFKAPRRD
AQAKMKRDML RAAITAEGDA FRNAIIFCNR KVDVDIVAKS LKKHNLNAEP IHGDLDQSHR
MRTLAGFRDG SITLLVASDV AARGLDIPNV SHVINYDVPS HAEDYVHRIG RTGRAGKTGV
AITLCVPSDE KYLGAIEGLI KQPIPRAEAP MDAGTPKAET EDKPRRSRRG GRRSEEPKAE
EKQADAAPEP AREEAKPEPQ RQQQPQPRRE RGDRGERNDR GGRGRGRDRG DRGPRIVGMG
DFTPDFIGLS FDERRGGPAR EMNLDEDEPA TEIPAETTVE APAETPTPTE EKPKRRRTRK
KPEPATEDAP AEAATEAPAG DDAPTEAAAD APVPEEKPKR RRAPRKKADA TPAEAEPDAP
APDGDAEEKP KRRRTRKKKV EEDAPEAADA ADPAEATADA PSAD
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