| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1168 |
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| Symbol | |
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| ID | 3933612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1132645 |
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| End bp | 1133538 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637903516 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_509110 |
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| Protein GI | 89053659 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.391598 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGTG CGGACCTTAA TGGCCTGAGA ACGTTTCTTG CGATTGTCGA GTGCGGCACC
CTGCGCGCCG CGGGAGATGA TCTGGGTGTG AACCCGTCGG CGGTTTCTCA GCAGCTCAAG
GGCTTTGAGG AGGCCCTTGG CAGCGCGTTG TTCGTTCGTA GCACGCGTTC TGTGGCGCTC
ACCGATACCG GTCAGGCGCT CTATGAGCGG ACCCATCATC TCATGGACGA GATCGACGCG
GCCCTTGATG CAACACGGCA TGCGGCCCGC TCGACATCAG GCCAGTTGCG GATCACCCTG
CCTTACAGGG CATGGCAACT CGCGCTTGCC CCAAGGATCA CCGCGTTTCA GGACCACTTT
CCCGAAATTG AGCTTGACCT CTCCATTGAC GAAGAACTCA CGGACATTGT TGCTAACGGC
TATCATGCCG GAATCCGCCT CGGAGACTAC CTGGCCGACG AAATGATAGC GGTCGCTCTT
ACGAAACCGC TCGACGGTGC GTTCGTCGCA AGCAAGGAAT ACCTGCAAAG GCATGGAGTA
CCCAAAAGAC CCGCTGACCT ACTCGGTCAC GACTGCATCC GATACCGCCA GATTGCATCG
AAGAAAGTTG CATCATGGCA GTTCGAAATC GATGGCATGG AAACCCGGAT CGAGGTGTCA
GGACGACTGA TATTCAGTGA TTTGAGATCG GTCATCGATG CAGCGGCCCA GGGCCTGGGA
ATTGGATGGT CCCTTCGGGA AGGGGTTGCG GCCCAAATTG AGTCCGGCGA ATTGATTGAA
GTTTTACGTG ACTACACGCC TCATCGACCA CGCTTCTATC TGTATTTTCC CCGACAGCTT
AGAGACATGA CAAGCCTTCG GGCGTTCATC GACCACTTCG CGATTGGTGC CTAG
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| Protein sequence | MNRADLNGLR TFLAIVECGT LRAAGDDLGV NPSAVSQQLK GFEEALGSAL FVRSTRSVAL
TDTGQALYER THHLMDEIDA ALDATRHAAR STSGQLRITL PYRAWQLALA PRITAFQDHF
PEIELDLSID EELTDIVANG YHAGIRLGDY LADEMIAVAL TKPLDGAFVA SKEYLQRHGV
PKRPADLLGH DCIRYRQIAS KKVASWQFEI DGMETRIEVS GRLIFSDLRS VIDAAAQGLG
IGWSLREGVA AQIESGELIE VLRDYTPHRP RFYLYFPRQL RDMTSLRAFI DHFAIGA
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