Gene Jann_1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1126 
Symbol 
ID3933570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1087087 
End bp1087800 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content64% 
IMG OID637903474 
Productglutamine amidotransferase, class I 
Protein accessionYP_509068 
Protein GI89053617 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.527906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.244414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCTCG GCATCCTGCA AACCGGCCAT GTTCCCGATG AAGTCGCCGC CAAAGACGGC 
CCCTACGGCA CGCTCTTCGC CAAGCTCTTT GCGCATCGTG GCTTCACGCA AACACTCTGG
TCCGTGGTCG ACGGAGATTT CCCAGATGGC CCCCATGCCG CCGATGCCTG GCTCATCACC
GGGTCCAGAC ATGGCGCCTA TGAGGATCAC CCCTGGATCC CGCCGCTGGA GGATCTGATC
CGCGCCATCC GCGACGCAAA GATTCCGCTC GTGGGCTCCT GCTTCGGGCA TCAGATCATC
GCGCAGGCCC TTGGCGGCAC AGTGGAAAAG TTCCGCGACG GCTGGTCCGT GGGCCACACC
GCCTATACCG CGAATGGCCG GACGTTGGCA CTGAACGCCT GGCATCAGGA TCAGGTGACC
ACGCTTCCCC CCGGGGCCAC GGTCCACGGT TCGTCCGACT TCTGCGACAA TGCTATCCTG
GCGATTGGCC CTCGCATCCT CACCACCCAG CCGCATCCGG AATTTGAGAA TTCGGTGATC
GAGACGCTAA TCGACACCAA GGGCCACCTG GTCGAGCCGG ACCGGCTTAC CACGGCAAAA
TCGCAGCTGG CGCGCGCCAA TGACAACCGC CTGATCGCCG ATTGGCTGGC CGATGTGCTG
GAAGGCGCGG ACGCCACGCA GCCGCGCCGC TTCAGGGTGG ATGCCGACGC ATGA
 
Protein sequence
MHLGILQTGH VPDEVAAKDG PYGTLFAKLF AHRGFTQTLW SVVDGDFPDG PHAADAWLIT 
GSRHGAYEDH PWIPPLEDLI RAIRDAKIPL VGSCFGHQII AQALGGTVEK FRDGWSVGHT
AYTANGRTLA LNAWHQDQVT TLPPGATVHG SSDFCDNAIL AIGPRILTTQ PHPEFENSVI
ETLIDTKGHL VEPDRLTTAK SQLARANDNR LIADWLADVL EGADATQPRR FRVDADA