Gene Jann_1120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1120 
Symbol 
ID3933564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1079914 
End bp1080471 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content65% 
IMG OID637903468 
Productacetyltransferase, putative 
Protein accessionYP_509062 
Protein GI89053611 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.262242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.137241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACG CACGTCCGCT GCCCGACGGT TTTGAGCTGA TCCCCCTGCG CTCCGCCACG 
CTGCACCTGC GGCCCATGGT GGCGCAGGAC TTGGCCGCAC TCACAATCGC CGGCAGCGAC
CCCGGCATCT GGGCGGGACA TCCGTCGACG GATCGCTACA AGCCGGACGT GTTCCGGCCG
TATTTTGAAG CTCTCCTCAA AGCGGGCGGC ACGCTGATCG CCGAAGACGC AAACGGCCAG
GCCATTGGAA TGTCGCGCTA TTATGCCTCT GCCGATGCGC CCGACGGCAT CGGGATCGGC
TTCACGTTTC TGGTACGAGC GCATTGGGGC GGGCAGACAA ACTTCGCCAT GAAACGCCTG
ATGCTGGACC ACCTCTTCGC CACCGCGCCA GAGGCCTGGT TTCACATCGC GCCCACCAAT
ATCCGATCCC AGAAGGCCAC CGCGAAGCTG GGGGCCGCGC GGATGGATAA CCTGACCCTC
GACCTCGGAA CCGGGCGCAT GGATTGGGTT CGGATGCGCC TGACCCGCGC GGCGTGGCAC
GACCAGTCCA ACCCCTAG
 
Protein sequence
MSDARPLPDG FELIPLRSAT LHLRPMVAQD LAALTIAGSD PGIWAGHPST DRYKPDVFRP 
YFEALLKAGG TLIAEDANGQ AIGMSRYYAS ADAPDGIGIG FTFLVRAHWG GQTNFAMKRL
MLDHLFATAP EAWFHIAPTN IRSQKATAKL GAARMDNLTL DLGTGRMDWV RMRLTRAAWH
DQSNP