| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1116 |
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| Symbol | |
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| ID | 3933560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1075095 |
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| End bp | 1076396 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903464 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_509058 |
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| Protein GI | 89053607 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.506981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0917886 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACAGC TACTCACCTA TGACCTAATG GAATCTATGC GGGTCACAAA TCAATGGATG
GGCGCATCGG CCCGCGCATT GTGCAGCTAT CCGCAACTGG GCCTGGCCGC AAATCCCTTC
ATCCAGCTAA CCGCCGCCTG GGGCGAAGTG GCCGAGCGGT CGTTCGCGCG CATGGCCGCC
AAGCCAGATT GGGGCATCAG CTCCATTCCC GGCGCGGATG GGCGCGACCA CGTGATCAGC
ATTGAACCGG TGATGGAGCG TGCGTTCGGC GACCTCATCC GCTTTGACGT GCAGGGACGG
GAGCCGACTG GCCGCAAGAT CCTGCTGGTC GCCCCGATGT CGGGCCATTA CGCCACGCTT
CTGCGCAAGA CGGTGCTGTC GCTGCTGCCC GACGCGGACG TCTACATCAC CGACTGGCAC
AATGCGCGCG ATATTCCGGT GAGTGCGGGC AAGTTCGATA TCGAGGATTA CACCCACTAC
CTGGTTGATT TCATGCGCGA GATGGGGCCG GACACAAACG TGATCGCCGT GTGCCAGCCC
GCGCCCCTAG CGCTTGCCGC GACCGCCTAT CTGGCGGAGG AAGACCCCAA GGCACAGCCC
CGCACGCTGA CCCTGATCGG TGGCCCGATT GACCCCGACG CCGCCGCCAC GGATGTGACC
GACTTTGGCC GCCGCGTGAC GATGGGGCAT CTGGAAAAGT TCGTCGTCCA GCGCGTCGGC
TTCAAATATG CGGGCGCGGG GCGGATGGTC TATCCGGGCA TCCAGCAGCT GGCCAGTTTC
ATGGCGATGA ACGCCGAAAC CCACGCCAAG GCGTTTTCTG ATCAGGTTGT CGCCGTCTCC
AAGGGCGAGG CCAGCGACCA CGACAAGCAC AACGTCTTCT ACGATGAATA TCTGGCGGTC
ATGGATATGA CGGCGGAATT CTACCTCAGC ACCGTGGAGC GGATCTTCAA AAACCGCGAG
ATTGCGAAAA ACACCTTCGT GGTCGACGGC AAGCCGGTGG ATATCGGCAA GATCACATCG
GTCGCGGTGA AGACGGTGGA GGGCGGGAAG GATGACATCT CGGCCCCCGG TCAATGTGTG
GCCGCTTTGG ATATGCTGAC CGGTCTGCCG GAGGAGAAGA AGGCCAATTA CATTGAGCCC
GACGCCGGCC ATTACGGCAT CTTCGCGGGC AAGTCCTGGC GCAACAACAT CCGGCCCCTG
GTGCTGGAAT TCATTGACGC CAATTCGGGC ATCAAAACGC CCGCCAAACG CGCCAAGCCG
AAGCTGGTCG AAGATCCGCC CGTCGAAAAC GTCGCGGTCT GA
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| Protein sequence | MRQLLTYDLM ESMRVTNQWM GASARALCSY PQLGLAANPF IQLTAAWGEV AERSFARMAA
KPDWGISSIP GADGRDHVIS IEPVMERAFG DLIRFDVQGR EPTGRKILLV APMSGHYATL
LRKTVLSLLP DADVYITDWH NARDIPVSAG KFDIEDYTHY LVDFMREMGP DTNVIAVCQP
APLALAATAY LAEEDPKAQP RTLTLIGGPI DPDAAATDVT DFGRRVTMGH LEKFVVQRVG
FKYAGAGRMV YPGIQQLASF MAMNAETHAK AFSDQVVAVS KGEASDHDKH NVFYDEYLAV
MDMTAEFYLS TVERIFKNRE IAKNTFVVDG KPVDIGKITS VAVKTVEGGK DDISAPGQCV
AALDMLTGLP EEKKANYIEP DAGHYGIFAG KSWRNNIRPL VLEFIDANSG IKTPAKRAKP
KLVEDPPVEN VAV
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