Gene Jann_1114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1114 
Symbol 
ID3933558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1073344 
End bp1074471 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content63% 
IMG OID637903462 
Productmethionine synthase, vitamin-B12 independent 
Protein accessionYP_509056 
Protein GI89053605 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0620] Methionine synthase II (cobalamin-independent) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.411336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.158114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAA CAACCCATGT GGGCAGCCTG CCGCGCACCC AGGACGTCGT GGACTTCATC 
TTTGCCCGGG AAAATGGCGA GACCTATGAC GCGGCCGCCT TCGACGCGGC GATGATGGCG
GCGGTGGATG ACACCGTGGC CAAACAGGTC GCAGCGGGCG TTGATGTCGT GTCCGATGGG
GAGACGTCGA AAATCTCCTA CGCGACCTAC GTCAAGGATC GATATACCGG GTTCTCCGGC
GACAGCCCGC GCAATGCGCC TGCGGACCTG AAGAAATTCC CGTCGTTCCT GAAGCGTCTG
GCCGATGATG GTGGCACGCC GCAATACGCG CGGCCCATGT GCACCGGAGA GGTGCGGAGC
AAGGGGCAGG GGGAGTTGGG CAAGGACATC GCCAACCTCA AGGCCGCGAT GGCCAAACAT
GGCGCGGAGG AGGGGTTCAT GAATGCGGCC TCTCCGGGTG TGATTTCGCT GTTCCTACAG
AACGATTTCT ACCCGACGCG GGACGCCTAT CTGGCCGCGC TGGCGGACGC GATGGCCGAG
GAATATCGGA CCATCGTCGA CGCCGGCCTG CTGTTGCAAC TGGATTGCCC CGACCTCGCG
CTGTCGCGGC ACATGTTGTT CAATGAACTG TCGGATGCGG AGTTTCTGAA GATCGCCGCC
TCCCATGTGG AAGCGTTGAA CCATGCGCTG TCGGGGATCG ACCCGTCCCG CGTGCGGGTC
CACATCTGCT GGGGTAATTA CGAGGGGCCC CATGTCTGCG ACGTGCCGAT GGACACGGTG
TTCACCACCT TCATGGGGGT CGGCGCGAGC CAGCTGTTGT TCGAGACGTC CAACCCCCGC
CATGCCCACG AATGGACCGT CTTCCGTGAC CGCGCGGCAG AGATCCCGGA CGACAAGATC
CTGGTGCCCG GCGTGGTCGA TACCACCACC AATTTCGTGG AGCATCCCGA ACTGGTCGCC
GAGCGGATCG CCAAGTTTAC CGGCATTGTG GGGGCCGACC GGGTGATTGC GGGAAGCGAT
TGCGGCTTTG GCACTTTCGC GGGGTTTGGC GCGGTGGATC CGACGATTGC CTATGCGAAA
CTGGAGGCGC TGTCCCAAGG CGTCGCTCTG GCGAATGGGC GGGGATAG
 
Protein sequence
MIKTTHVGSL PRTQDVVDFI FARENGETYD AAAFDAAMMA AVDDTVAKQV AAGVDVVSDG 
ETSKISYATY VKDRYTGFSG DSPRNAPADL KKFPSFLKRL ADDGGTPQYA RPMCTGEVRS
KGQGELGKDI ANLKAAMAKH GAEEGFMNAA SPGVISLFLQ NDFYPTRDAY LAALADAMAE
EYRTIVDAGL LLQLDCPDLA LSRHMLFNEL SDAEFLKIAA SHVEALNHAL SGIDPSRVRV
HICWGNYEGP HVCDVPMDTV FTTFMGVGAS QLLFETSNPR HAHEWTVFRD RAAEIPDDKI
LVPGVVDTTT NFVEHPELVA ERIAKFTGIV GADRVIAGSD CGFGTFAGFG AVDPTIAYAK
LEALSQGVAL ANGRG