| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1114 |
|---|
| Symbol | |
|---|
| ID | 3933558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1073344 |
|---|
| End bp | 1074471 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637903462 |
|---|
| Product | methionine synthase, vitamin-B12 independent |
|---|
| Protein accession | YP_509056 |
|---|
| Protein GI | 89053605 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.411336 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.158114 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAA CAACCCATGT GGGCAGCCTG CCGCGCACCC AGGACGTCGT GGACTTCATC
TTTGCCCGGG AAAATGGCGA GACCTATGAC GCGGCCGCCT TCGACGCGGC GATGATGGCG
GCGGTGGATG ACACCGTGGC CAAACAGGTC GCAGCGGGCG TTGATGTCGT GTCCGATGGG
GAGACGTCGA AAATCTCCTA CGCGACCTAC GTCAAGGATC GATATACCGG GTTCTCCGGC
GACAGCCCGC GCAATGCGCC TGCGGACCTG AAGAAATTCC CGTCGTTCCT GAAGCGTCTG
GCCGATGATG GTGGCACGCC GCAATACGCG CGGCCCATGT GCACCGGAGA GGTGCGGAGC
AAGGGGCAGG GGGAGTTGGG CAAGGACATC GCCAACCTCA AGGCCGCGAT GGCCAAACAT
GGCGCGGAGG AGGGGTTCAT GAATGCGGCC TCTCCGGGTG TGATTTCGCT GTTCCTACAG
AACGATTTCT ACCCGACGCG GGACGCCTAT CTGGCCGCGC TGGCGGACGC GATGGCCGAG
GAATATCGGA CCATCGTCGA CGCCGGCCTG CTGTTGCAAC TGGATTGCCC CGACCTCGCG
CTGTCGCGGC ACATGTTGTT CAATGAACTG TCGGATGCGG AGTTTCTGAA GATCGCCGCC
TCCCATGTGG AAGCGTTGAA CCATGCGCTG TCGGGGATCG ACCCGTCCCG CGTGCGGGTC
CACATCTGCT GGGGTAATTA CGAGGGGCCC CATGTCTGCG ACGTGCCGAT GGACACGGTG
TTCACCACCT TCATGGGGGT CGGCGCGAGC CAGCTGTTGT TCGAGACGTC CAACCCCCGC
CATGCCCACG AATGGACCGT CTTCCGTGAC CGCGCGGCAG AGATCCCGGA CGACAAGATC
CTGGTGCCCG GCGTGGTCGA TACCACCACC AATTTCGTGG AGCATCCCGA ACTGGTCGCC
GAGCGGATCG CCAAGTTTAC CGGCATTGTG GGGGCCGACC GGGTGATTGC GGGAAGCGAT
TGCGGCTTTG GCACTTTCGC GGGGTTTGGC GCGGTGGATC CGACGATTGC CTATGCGAAA
CTGGAGGCGC TGTCCCAAGG CGTCGCTCTG GCGAATGGGC GGGGATAG
|
|---|
| Protein sequence | MIKTTHVGSL PRTQDVVDFI FARENGETYD AAAFDAAMMA AVDDTVAKQV AAGVDVVSDG
ETSKISYATY VKDRYTGFSG DSPRNAPADL KKFPSFLKRL ADDGGTPQYA RPMCTGEVRS
KGQGELGKDI ANLKAAMAKH GAEEGFMNAA SPGVISLFLQ NDFYPTRDAY LAALADAMAE
EYRTIVDAGL LLQLDCPDLA LSRHMLFNEL SDAEFLKIAA SHVEALNHAL SGIDPSRVRV
HICWGNYEGP HVCDVPMDTV FTTFMGVGAS QLLFETSNPR HAHEWTVFRD RAAEIPDDKI
LVPGVVDTTT NFVEHPELVA ERIAKFTGIV GADRVIAGSD CGFGTFAGFG AVDPTIAYAK
LEALSQGVAL ANGRG
|
|---|
| |