Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1101 |
Symbol | |
ID | 3933545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1061682 |
End bp | 1062425 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637903449 |
Product | ArsR family transcriptional regulator |
Protein accession | YP_509043 |
Protein GI | 89053592 |
COG category | [K] Transcription |
COG ID | [COG0640] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000298233 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0138971 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACCC TGTTCAAAGC CCTCAGCGAC CCGGCCCGCC GCGCCATCCT CGACAGCCTG CGCGCCCGCG ATGGCCAGTC CCTCACGGAT CTGGAACCGC AACTCGACAT GACGCGGTTC GGCGTGATGA AGCACCTCAA GCTGCTGGAA GACGCGGGCC TGATCGTCAC CAAACGACAG GGCCGGTTCA AGTATCACTA CCTCAACCCC ATGCCCCTGC AGGAGATGCT CGACCGTTGG GTCGCGCCGT TCCTGCAACC GCAAGCCAGA CACCTCTCTG ATTTAAAAGC AAAACTTGAA AGGAGCCACA CAATGGGCAA ACCAGATTTC ATGATGCAGA CGTTCATCCG CTGCACCCAG GACGCGCTAT GGGACGCGCT GACGAAGGCC GACCAGATGG CCGCGTATCA CTTCATGTGC AACGAGGTGC GCGGCAATGC CAGCGTCGGC AACGTGACCG AGTTCGTCCT GCCCGATGGC AACCCCATGC TCCGCCAGGT CACCACCGAA CTGGATCCGA AATCCCGCAT CGCGGCGACG TTTGAGCCGA TGTTCATGGG CCCCGACGCC CCCGCCTCTC ACATGGTCTA CCTGATCGAG CCCCAGGGAG AGACCTGTAA ACTGACCATC GAACACTACG ATATGGCCCC GGGCCAGGAG GGCTTTGCCG AAGGATGGGC ACGCCTCGCC TCATCGCTGA AATCCTACCT GGAGACCGGC AAAGCCATGA AAGGAGCCGC CTGA
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Protein sequence | MDTLFKALSD PARRAILDSL RARDGQSLTD LEPQLDMTRF GVMKHLKLLE DAGLIVTKRQ GRFKYHYLNP MPLQEMLDRW VAPFLQPQAR HLSDLKAKLE RSHTMGKPDF MMQTFIRCTQ DALWDALTKA DQMAAYHFMC NEVRGNASVG NVTEFVLPDG NPMLRQVTTE LDPKSRIAAT FEPMFMGPDA PASHMVYLIE PQGETCKLTI EHYDMAPGQE GFAEGWARLA SSLKSYLETG KAMKGAA
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