Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1100 |
Symbol | |
ID | 3933544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1061269 |
End bp | 1061682 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637903448 |
Product | hypothetical protein |
Protein accession | YP_509042 |
Protein GI | 89053591 |
COG category | [S] Function unknown |
COG ID | [COG3686] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000107053 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0128168 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACCC TTCCCACCGA ACTGGGCGTG CTGACCTGCC TGATGCTTCT GGCAGCCTCG CTCTGGATCC CCTACATCGT CGGCGTCAAC AAATATGAAC GCGAAGGCGT GGACAGCTTC CAGCGCCCCC CCGGCGATGA CGGCCTGCCC GATTGGGTGG CCCGCGCCAA CCGCGCCCAC TTGAACCTGC TCGAACAGGG CATGCCCTTC GCGGTCATCA TCCTGATCCT CCACCTCGCC GATGGTTTCA CCGCCGTCAC CTACTGGACC GCCATCGTGT TCTTCTGGCT GCGCGTGGCC CACGCCGTAG GGATGATCAC CGGCACGGCA CGCATGCCGC TCCGCCCATT GATCTTCACC GCAGGCTGGG TCTGCATCAT GATCCTCGGC GTCTCGGCCT TCATGGCAGG CTGA
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Protein sequence | MSTLPTELGV LTCLMLLAAS LWIPYIVGVN KYEREGVDSF QRPPGDDGLP DWVARANRAH LNLLEQGMPF AVIILILHLA DGFTAVTYWT AIVFFWLRVA HAVGMITGTA RMPLRPLIFT AGWVCIMILG VSAFMAG
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