Gene Jann_0989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0989 
Symbol 
ID3933433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp947747 
End bp948250 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content62% 
IMG OID637903337 
Productpeptidase A24A, prepilin type IV 
Protein accessionYP_508931 
Protein GI89053480 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0532499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCA CGCTGACATC GCTGGAAGCC CTGTGGTTTC TGCCCTTCGC CATCCCGATT 
TGTATCTGGG TCGCCCTCTC GGATCTGCGC CAGATGCGCA TCCCGAATGT CGCCGTTTTG
GCATTGACAG GGGGCTTCCT GATCACCGGC CTCTTTGCGC TGCCGATGGA TGCATATCTC
TGGCGTCTGG CGGCCCTTGG CATCGTGCTT CTGGCGGGCT TTGTGATCAC CTCCCTTGGC
CTCGTCGGTG CGGGCGACAG CAAGTTCGCG GCCGCCATGG CCCCGTTCAT TGCGCCCGGT
GACTACTTGT TTTTCCTGGC TTTATTCAGC CTCGTGCTGA TCGGATCCTG GATCACTCAC
CGCAGCGCGG GCCGGGTGCC CGCCGTGCGC CGCGCCACAG CCCATTGGTC CAGTTGGGAA
CAGGGCAAAT TGTTCCCCAT GGGCGTCGCC CTGGCCGGGG CCTTGGTCAT TTATCTGATG
ATGGGACTTT CTGCCGGGCT GTAA
 
Protein sequence
MTLTLTSLEA LWFLPFAIPI CIWVALSDLR QMRIPNVAVL ALTGGFLITG LFALPMDAYL 
WRLAALGIVL LAGFVITSLG LVGAGDSKFA AAMAPFIAPG DYLFFLALFS LVLIGSWITH
RSAGRVPAVR RATAHWSSWE QGKLFPMGVA LAGALVIYLM MGLSAGL