| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0933 |
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| Symbol | |
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| ID | 3933377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 887501 |
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| End bp | 888586 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637903281 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_508875 |
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| Protein GI | 89053424 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.681198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCC TCGAAAAGCG CCCCACCCCG TCGCGTGCCT GGTCTCTGGC GACACCCGTC
CTGGCCGTAT TCCTCACGAT GATCGCAGGC GGGCTGATGT TCGCGGCCCT CGGGCAGGAT
CCGTTGGAGG TCATCCGTGT CATCTTCTGG GACCCGCTTT TCCACGACCG CTTCGCCGCC
TTCTCGCGTC CGCAACTGCT GGTCAAAGCA GGTCCGCTGA TCCTAATCGC GATCGGTCTG
TCGCTCGGCT TTCGGGCGGG CATCTGGAAC ATTGGCGCAG AGGGGCAATA CATCATTGGC
GCGCTCTGCG GCGCAGCCTT CGGCCTCGCA TTCTGGCCAT CGGAAAGCCC CCTGATCTTG
CCCGGCATGA TCGTTGCGGG GCTCCTGGGC GGCATGCTTT GGGCGATGAT CCCGGCACTT
CTCAAGGTCA AAGCCAACAC CAATGAGATC CTCGTGTCCC TGCTGCTGGT CTACGTGGCC
GAAGCCATCC TCGCGTCTGC GGCCACAAAC TGGCTGCGCA ACCCCGACGG CCAGGGTTTC
CCCGGATCGC GCAACCTCGC GCGCCATGCC GGCACCGACA ATCCAGAGCT TTTCGACGGC
ACCGGCATCC ATCTGGGCGT CGTGGCGGCC CTGATCGCCG TGATTGCGGC CTACGTGTTG
TTCCAGAAAC ACCTACTCGG ATATCAGATC AAACTGGCGG GCCAGGCCCC CCGCGCGGCG
CGGTTCGCAG GCGTCAGCCC CGCGCGCATG GTGGTGCTCT GCCTCGGTGT CTCCGGTGCG
CTGGCGGGTG CGGCGGGCCT GTTTGAGGCC GCGGGCCCTG CCGGGCAGAT CACCATCGAC
TTTAACGTCG GCTACGGCTT CACCGCGATC ATCGTGGCCT TTCTGGGCCG ATTGCACCCC
GTTGGCATCC TCTTTGCGGG CCTGCTGATG GCACTGACCT ATATCGGAGG CGAGCTTGCG
CAACTCCTCC TCCAGGTGCC AGCCCCTGCA ATCCAGGCCT TCCAGGGTAT GCTGCTGTTC
TTCCTCCTCG CGCTCGACGT GTTGTCCAAC TACCGCATCC GCATCGGGCG GGAGCGCGTC
GCATGA
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| Protein sequence | MIRLEKRPTP SRAWSLATPV LAVFLTMIAG GLMFAALGQD PLEVIRVIFW DPLFHDRFAA
FSRPQLLVKA GPLILIAIGL SLGFRAGIWN IGAEGQYIIG ALCGAAFGLA FWPSESPLIL
PGMIVAGLLG GMLWAMIPAL LKVKANTNEI LVSLLLVYVA EAILASAATN WLRNPDGQGF
PGSRNLARHA GTDNPELFDG TGIHLGVVAA LIAVIAAYVL FQKHLLGYQI KLAGQAPRAA
RFAGVSPARM VVLCLGVSGA LAGAAGLFEA AGPAGQITID FNVGYGFTAI IVAFLGRLHP
VGILFAGLLM ALTYIGGELA QLLLQVPAPA IQAFQGMLLF FLLALDVLSN YRIRIGRERV
A
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