| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0929 |
|---|
| Symbol | |
|---|
| ID | 3933373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 885164 |
|---|
| End bp | 885988 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637903277 |
|---|
| Product | Ion transport protein |
|---|
| Protein accession | YP_508871 |
|---|
| Protein GI | 89053420 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.765221 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGA CCGATATCAT CGACATTCTG GACGGCACGC ACCCCCGCGT GGGGAGGGGT
GTGGCGCTTG GCATCTACGC GCTCATCTGC GCCTCTGCCG TTGTGATCGC GCTTGAGACA
CTGCCAGACC TCACGGACCG CACGAACGCG ATCCTTGTCG GCGCGGAAAT CGGGATCCTC
ACCCTCTTCG TCGTTGAATA TGTGCTGCGC CTGACCTGTT CGGAGAAGCC GTGGAAATAC
GCGTTCAGCT TCTGGGGCAT CGTCGATTTC CTCGCCATCG TGCCCGCTCT GGTGTTTCTG
CTGCCGGATT TCGCCACGAT CCGTGCGATC CGTCTTCTGC GCATCCTGCG GCTTCTCAAG
CTGTTCAAGG CCAACCGCGC GCTGGACCGC ATCGCCAAGG CGCTCAACCG TGCCAAGGCG
GAGTTTGCGA TCTTCTTCTT CATTGCCTGC GTCGCGCTGT ATCTGGCCGC CGTGGGCATT
TATCATTTCG AGCATGAGGC GCAGCCTGAA GGCTTTTCAT CCATTCCCGA AAGCCTGTGG
TGGGCCATCG CGACCTTCAC CACAGTGGGC TACGGCGACG TCTATCCCAT CACGGCCGGG
GGGCGGATTT TCACCGGCCT CGTGATGCTG ATCGGGATCG GCATCATCGC TGTGCCCGCG
GGGCTCGTGA CAGCAGCGCT TACCGAAGCA TCACCAACGG ACACAAATTC CGCAGATGTG
CCTCCCAAAA GCGCATCGCC GGTTCAGGTC GACATGCGCC CCGGGACACC GGCCCTGCCA
TCAGATACAG AGACACCAGA ATCCAACAGA GGGGATGATT CATGA
|
|---|
| Protein sequence | MKRTDIIDIL DGTHPRVGRG VALGIYALIC ASAVVIALET LPDLTDRTNA ILVGAEIGIL
TLFVVEYVLR LTCSEKPWKY AFSFWGIVDF LAIVPALVFL LPDFATIRAI RLLRILRLLK
LFKANRALDR IAKALNRAKA EFAIFFFIAC VALYLAAVGI YHFEHEAQPE GFSSIPESLW
WAIATFTTVG YGDVYPITAG GRIFTGLVML IGIGIIAVPA GLVTAALTEA SPTDTNSADV
PPKSASPVQV DMRPGTPALP SDTETPESNR GDDS
|
|---|
| |