| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0898 |
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| Symbol | |
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| ID | 3933342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 854342 |
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| End bp | 855454 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637903246 |
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| Product | ABC-type branched-chain amino acid transport systems periplasmic component-like |
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| Protein accession | YP_508840 |
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| Protein GI | 89053389 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTGG TCCTGACGGC GTGTCAGATC GGCGGCGGCC CCATCGGGCT GACCGGCGGC
CCCCGGGTGG GCCAGACGGT TCAGGTGGCC ATGCTCCTGC CGATGAGCGG AAGTGGCGGC
GACGCCCTTC TGTCGCGCAG TCTGGAGAAT GCCGCGCGGC TTGCGGCCTC CGACGTGGCC
GCCACAACCA CCATCGACAT CACGGTCTAC GACACCGGCG GCGATGCGGC CACCGCCGCC
ACGCGCGCCC AGGAAGCCAT CTCCGCAGGC GCTGACGTGA TCGTCGGGCC GCTCCGCTCC
GATGCCGCCG CCGCCGTGGG CGTGGCCGTC GCCAACTCCA ACGTGGCCGT GCTCAGCTTC
TCCAACAATA CCGAGATCGC GGGCGGCAAC GTCCTGGTCC TGGGCTACAC TTTCGCCAAC
ACCGCCTCCC GGATCGTGGG CTATTCGGCC CGCCAGGGTC GTGGAAACAT CGTGGTCGTC
CACGCCAACA ACCTGGCCGG CGAAGTGGCG CGCGACGCCG TGCGCAATGC CGCCTCGCTC
TCGGGTGCCA CGATTTCGGC GACCATTCCC TATGAATTCA GCCAAGTGGG CGTCGTAAAC
GTCGTCTCCG AGGTAACCGC CGCCGTCCGG TCCGGCGGGG CCAATGCCGT GCTGCTCACC
TCCGACAGTG CAGGCGCGCT GCCGCTCTTC GCGCAGTTGC TGCCTGAAAA CGGCCTGGAC
ACATCGGTGA CCCAGATGAT GGGCCTGACC CGCTGGGACA TTCCACCGGC AACATTGGAA
TTCTCCGGCC TGCAGGGCGG GTGGTTCACG CTGCCTGATC CCAACGCCGC CACCGCCTTC
AACAGCCGCT ATGCCGCCGT GAACGTGGGC GCACCCCACG CCCTTGGTGG TCTTGGCTAT
GATGCCGTGC GGGCCATTGC CGCGGCCGCC CCGTCGGGTC GCATTGGCAC GGCGGAGCTT
GTCGCGGCAG GGCAGGTCGA AGGGTCCGCG GGGGCGTTCC GCTTCCTGAA CGATGGCACG
ATCGAGCGTG CGCTGGCCGT GGCCGAGATC GTCAACCAAC AGGTGAGTGT CATTGACCCT
GCCCCAAGAC GCCTCGGCGG TCCCGGTCTC TGA
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| Protein sequence | MSLVLTACQI GGGPIGLTGG PRVGQTVQVA MLLPMSGSGG DALLSRSLEN AARLAASDVA
ATTTIDITVY DTGGDAATAA TRAQEAISAG ADVIVGPLRS DAAAAVGVAV ANSNVAVLSF
SNNTEIAGGN VLVLGYTFAN TASRIVGYSA RQGRGNIVVV HANNLAGEVA RDAVRNAASL
SGATISATIP YEFSQVGVVN VVSEVTAAVR SGGANAVLLT SDSAGALPLF AQLLPENGLD
TSVTQMMGLT RWDIPPATLE FSGLQGGWFT LPDPNAATAF NSRYAAVNVG APHALGGLGY
DAVRAIAAAA PSGRIGTAEL VAAGQVEGSA GAFRFLNDGT IERALAVAEI VNQQVSVIDP
APRRLGGPGL
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