| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0887 |
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| Symbol | |
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| ID | 3933331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 842206 |
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| End bp | 843126 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637903235 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_508829 |
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| Protein GI | 89053378 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0888177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGACC TGCGCCTCAT CGAGACGTTC ATTCAAGCCG CGCGCCGGGA GAGCTTTTCC
AGCGCAGCAA AGGCGCTGCA TGTCAGTCCC GGTGCCGTAA GCCAGAACAT CAAGTCTCTT
GAGGAGCAGC TTCAGACACG TCTGTTCACG CGCACAACAC GCCAGATCAA GCTGACACCA
GAGGGTCAAC GGTTCCTGCA ACGCTGTGCG CCAGCGGTCG AGGCGCTGCA AACGGCAGCC
AGCGCGATCC AAGACGAACG CGAGGCGTTT CAGGGTCGCC TGCGCATCAC ATCCACAACG
GCCTTTGGCC GCGCGGAGAT CCTGCCACTC ATCGCGAGCT TTCAAGAGAC ACACCCGGAG
CTCGAAATCG AGCTGTCGCT GTCTGACGGC TTTGTCGATT TGGTGGCCGA AGAATACGAT
CTTGCGATCC GGGGCGGTAT CCTCCCGGAC AGCGACTACA TCGCGCGATT GCTGATACCG
GTGACACCAC TGGTCTGCGC CGCTCCCGGC TACCTTAAGA AATTCGGCAT ACCAAAGAAT
GAAGCCGATC TGGCGAGCCA CCGGTTGATT GGAATGCGCT CCAATCCATC ACAGCGCGTC
TTTGCTTGGG AATTTTCTGA TCCTGACTCT CCCCAGCCCA GGCGGGTGGA AGTCACACCG
ACCAGCGTCA TGAACGATCC GGAAAGCACA GTACGGGCAG CGAGCCTCGG CATGGGACTG
GCACAGGTCG GCAGCAATGT GGTTTTGCCA CTCGTCGCGT CCGGAGAGTT GCGGATCGTA
TTTCCAGAAG CCGCTGTGCA AAGTCGCGGC CTCTACGCCG TTTATCCGTC AAAAAGGTTC
GCGCCAAAGA AGCTGACCGC CTTTTTGGAT CATTTGGTCG ACGGCTTCAG TCAAAGGGCC
GATCTGATTT ATACACATTA G
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| Protein sequence | MIDLRLIETF IQAARRESFS SAAKALHVSP GAVSQNIKSL EEQLQTRLFT RTTRQIKLTP
EGQRFLQRCA PAVEALQTAA SAIQDEREAF QGRLRITSTT AFGRAEILPL IASFQETHPE
LEIELSLSDG FVDLVAEEYD LAIRGGILPD SDYIARLLIP VTPLVCAAPG YLKKFGIPKN
EADLASHRLI GMRSNPSQRV FAWEFSDPDS PQPRRVEVTP TSVMNDPEST VRAASLGMGL
AQVGSNVVLP LVASGELRIV FPEAAVQSRG LYAVYPSKRF APKKLTAFLD HLVDGFSQRA
DLIYTH
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