Gene Jann_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0871 
Symbol 
ID3933315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand+ 
Start bp827308 
End bp827862 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content62% 
IMG OID637903219 
Producthypothetical protein 
Protein accessionYP_508813 
Protein GI89053362 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0544539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.144695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGG GGCACGATCA GCCCCCGGCC TCGGGTGACG CGGATCGGGC ACCCTCCCTG 
TCCAGTATCG ACAGGGTGCT TGGCACCTTG TCCCGCGTCG CGGCGGGGAT CGGCGCTTTG 
TGGATCTTTG GCATCATGGT GTTGATCAAC CTGGATGTCG TGATGCGCGG TGTCGCCTCC 
GCCCCCTTGC CGGCGGTGCC AGAATTCGTG GCGCTCTCCA TCACCGGGAT CGTGTTCCTG 
CAACTGGCGG CCGCCCTCCG CTCAGGCCGG TTCATCAAAT CAGACGCCCT GGGTGCGATC 
CTGTTTGAGC GGGTCCCAGT CCTGGGCCGT GTATTGCGAC CTGCGATGTA CGCCCTTGGC 
GCGACCTTAT TTTCCGTTCT GGCCTATGCC AGCTGGCGCA TTTTGATGCG CGCGATTGAA 
CGCGGCACCT ATGTGGGCAC CATCGGCGGC GTTACGTTTC CAATCTGGCC GATCTCTCTG 
ATCATCGTGT TGGGGGCCTG CCTCGTGGCG CTGGAATATG CGCTGATGGC CTTGAAAGAG 
GTATTGAGTA GATGA
 
Protein sequence
MSQGHDQPPA SGDADRAPSL SSIDRVLGTL SRVAAGIGAL WIFGIMVLIN LDVVMRGVAS 
APLPAVPEFV ALSITGIVFL QLAAALRSGR FIKSDALGAI LFERVPVLGR VLRPAMYALG 
ATLFSVLAYA SWRILMRAIE RGTYVGTIGG VTFPIWPISL IIVLGACLVA LEYALMALKE 
VLSR