| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0869 |
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| Symbol | |
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| ID | 3933313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 825338 |
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| End bp | 826153 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903217 |
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| Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
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| Protein accession | YP_508811 |
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| Protein GI | 89053360 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.205582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.143487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTGA TGTGGTTCGA AAAAGACGGT GAGACGCGGC TTGGCGCGCG GTCCGAGGCG
GGCATCACGG CCCTTACCGG GCAGGACATG GTCGCAGCTT TGGCCGAGAC ACCCGTGCAG
GGTGCTGCGG TATCGGACCC GGTCACGGCC CTGCCGCCGG TCACGCCAAC CGCCAAGATC
CTGTGTGTTG CGTTGAACTA CGTGGACCAC GCGAAGGAGG CGAACCAGCC GGTTCCGGAA
ACGCCCATTG TCTTCTTCAA GACCTTTGAT GCGATGATTG CAGGCGGGGC GCCGATCCGT
GCGCCCCGGA TGATCACGCA ACTCGACTAC GAGGGTGAAC TGGCGCTGAT CATCGGCAAA
CGTGGCTTTG ACATCGCCAA GACCGACGCC TGGGATCACA TCGCGGGCGT CACCACGCTG
AACGATGTCT CGGCCCGCGA TATCTTCAAG GTCAAGGCCG GTGCTGCGAG CCATCTTGAC
TGGTTTTCGG GCAAATGCCT GAACCAGTCC ACGCCCATCG GGCCCGAGGT CTTTCCGCTA
TCGGCCATCG AAGACGATCT GAAGGCTGGC ACCACCCGCA TCAGATGCCT GGTGAACGGT
GAGGTGCGCC AGGATGCGCC CGTCGCAGAC ATGATCTTCG ACATTCCAAC GATGATCGCC
TTCATCTCAA GCCGTATCCC GCTGAACCCC GGTGACATTA TCGCCACCGG CACGCCCCCC
GGCGTCGGCG CGGGCACGGA CCGCTATCTG AGCAAAGGTG ACGTGGTCCG GGTTGAGGTG
ACAGGATTGC CGCCGATGGA AAACACGGTG GCCTGA
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| Protein sequence | MGLMWFEKDG ETRLGARSEA GITALTGQDM VAALAETPVQ GAAVSDPVTA LPPVTPTAKI
LCVALNYVDH AKEANQPVPE TPIVFFKTFD AMIAGGAPIR APRMITQLDY EGELALIIGK
RGFDIAKTDA WDHIAGVTTL NDVSARDIFK VKAGAASHLD WFSGKCLNQS TPIGPEVFPL
SAIEDDLKAG TTRIRCLVNG EVRQDAPVAD MIFDIPTMIA FISSRIPLNP GDIIATGTPP
GVGAGTDRYL SKGDVVRVEV TGLPPMENTV A
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